Cow genome map

Conread name: reje28b_a18.y1

Conread position: 369-575
Cow position: chr12:4512279-4512475 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 378-583
Cow position: chr12:5635289-5635486 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 379-575
Cow position: chr12:25814319-25814128 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 41

Conread position: 379-583
Cow position: chr12:33851518-33851328 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 379-584
Cow position: chr12:44542425-44542232 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 379-587
Cow position: chr12:26147006-26147207 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 380-583
Cow position: chr12:23939380-23939190 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 380-583
Cow position: chr12:42879860-42879661 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 88, 40

Conread position: 380-588
Cow position: chr12:40157867-40158060 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 381-569
Cow position: chr12:22485973-22485787 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 381-587
Cow position: chr12:15389230-15389034 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 382-567
Cow position: chr12:11106417-11106598 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 40

Conread position: 382-581
Cow position: chr12:47267149-47267340 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 382-584
Cow position: chr12:3623850-3623660 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 383-585
Cow position: chr12:42944296-42944099 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 38

Conread position: 384-588
Cow position: chr12:45001903-45002105 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 385-583
Cow position: chr12:24663274-24663081 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 83, 13

Conread position: 385-588
Cow position: chr12:21780320-21780124 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 387-556
Cow position: chr12:42562052-42561896 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 387-581
Cow position: chr12:24437478-24437666 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 387-581
Cow position: chr12:25456575-25456377 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 81, 33

Conread position: 387-583
Cow position: chr12:29731465-29731281 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 387-587
Cow position: chr12:38154914-38155108 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 36

Conread position: 387-588
Cow position: chr12:30590923-30590726 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 176, 46

Conread position: 387-588
Cow position: chr12:35770870-35771059 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 387-588
Cow position: chr12:42180974-42181167 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 388-562
Cow position: chr12:583351-583522 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 32

Conread position: 388-577
Cow position: chr12:6958372-6958192 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 31

Conread position: 388-578
Cow position: chr12:44013436-44013627 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 32

Conread position: 388-580
Cow position: chr12:12301080-12300890 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 31

Conread position: 388-581
Cow position: chr12:18939028-18938837 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 388-581
Cow position: chr12:30806006-30805822 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 33

Conread position: 388-581
Cow position: chr12:31883499-31883307 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 32

Conread position: 388-582
Cow position: chr12:1889427-1889610 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 388-582
Cow position: chr12:25561519-25561338 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:2734758-2734941 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:4341582-4341777 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 35

Conread position: 388-583
Cow position: chr12:4596626-4596435 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 32

Conread position: 388-583
Cow position: chr12:6241477-6241286 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 32

Conread position: 388-583
Cow position: chr12:14986900-14986716 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:18518825-18518640 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:19502261-19502461 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 32

Conread position: 388-583
Cow position: chr12:23714825-23714642 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:26357214-26357404 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 32

Conread position: 388-583
Cow position: chr12:27430673-27430473 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 60

Conread position: 388-583
Cow position: chr12:31841723-31841536 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr12:36993940-36994149 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 32

Conread position: 388-584
Cow position: chr12:7110361-7110163 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 32

Conread position: 388-584
Cow position: chr12:23836487-23836297 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 23

Conread position: 388-584
Cow position: chr12:29057543-29057355 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 388-584
Cow position: chr12:35368797-35368608 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 388-584
Cow position: chr12:38774092-38774277 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 388-587
Cow position: chr12:43551063-43551259 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 107, 32

Conread position: 388-588
Cow position: chr12:3675361-3675565 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 32

Conread position: 388-588
Cow position: chr12:4769072-4768888 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr12:13911423-13911619 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 136, 32

Conread position: 388-588
Cow position: chr12:19258429-19258242 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 20

Conread position: 388-588
Cow position: chr12:23106092-23105899 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr12:37008557-37008741 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 388-588
Cow position: chr12:43855043-43854856 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 388-588
Cow position: chr12:45167855-45168057 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 23

Conread position: 388-590
Cow position: chr12:33976356-33976161 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 32

Conread position: 388-591
Cow position: chr12:20654328-20654513 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 40

Conread position: 389-541
Cow position: chr12:13995642-13995789 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-570
Cow position: chr12:12699486-12699661 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 389-572
Cow position: chr12:11272677-11272848 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-573
Cow position: chr12:35310530-35310708 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 31

Conread position: 389-580
Cow position: chr12:35137073-35136889 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 389-581
Cow position: chr12:6206486-6206300 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 31

Conread position: 389-581
Cow position: chr12:26217675-26217855 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 389-581
Cow position: chr12:26749798-26749983 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 389-584
Cow position: chr12:32374751-32374558 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 31

Conread position: 389-584
Cow position: chr12:34333268-34333076 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 389-584
Cow position: chr12:37480685-37480869 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 389-586
Cow position: chr12:9130055-9129873 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 389-587
Cow position: chr12:10827938-10827748 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr12:10942446-10942250 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 73, 31

Conread position: 389-587
Cow position: chr12:14223135-14222944 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr12:25823076-25823264 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 389-587
Cow position: chr12:38126369-38126561 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr12:39149897-39150089 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 99, 31

Conread position: 389-588
Cow position: chr12:31269310-31269116 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 27

Conread position: 389-588
Cow position: chr12:35240951-35241143 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr12:40910133-40910327 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 31

Conread position: 389-589
Cow position: chr12:9482150-9482344 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 93, 31

Conread position: 389-590
Cow position: chr12:16386304-16386497 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 389-590
Cow position: chr12:17250656-17250475 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-591
Cow position: chr12:24397013-24397204 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 390-579
Cow position: chr12:7884529-7884710 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 390-588
Cow position: chr12:29200227-29200434 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 30

Conread position: 390-588
Cow position: chr12:36790662-36790850 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 390-590
Cow position: chr12:24152493-24152298 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 30

Conread position: 391-569
Cow position: chr12:31602671-31602841 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 391-571
Cow position: chr12:22048074-22047903 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-572
Cow position: chr12:22752782-22752603 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 42

Conread position: 391-577
Cow position: chr12:22323117-22323301 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 29

Conread position: 391-577
Cow position: chr12:29966255-29966078 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-580
Cow position: chr12:13988524-13988339 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 29

Conread position: 391-581
Cow position: chr12:45782373-45782195 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 391-583
Cow position: chr12:6410586-6410768 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 146, 30

Conread position: 391-583
Cow position: chr12:37123802-37123616 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 26

Conread position: 391-583
Cow position: chr12:43974442-43974260 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-584
Cow position: chr12:8943065-8943258 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 28

Conread position: 391-587
Cow position: chr12:4720094-4719910 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 391-587
Cow position: chr12:6187959-6188151 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 29

Conread position: 391-588
Cow position: chr12:3057239-3057049 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr12:11587919-11587736 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 391-588
Cow position: chr12:18103467-18103647 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 391-588
Cow position: chr12:27563229-27563415 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 391-588
Cow position: chr12:32051670-32051472 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 29

Conread position: 392-566
Cow position: chr12:30042877-30042709 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 392-569
Cow position: chr12:38552342-38552175 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 392-577
Cow position: chr12:22515589-22515759 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 392-580
Cow position: chr12:15122474-15122294 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 28

Conread position: 392-582
Cow position: chr12:19400667-19400848 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 28

Conread position: 392-584
Cow position: chr12:29674990-29675176 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 392-587
Cow position: chr12:25809583-25809392 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 19

Conread position: 392-588
Cow position: chr12:23574919-23574725 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 27

Conread position: 392-588
Cow position: chr12:37993573-37993770 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 28

Conread position: 393-562
Cow position: chr12:44861109-44861272 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 393-575
Cow position: chr12:20355371-20355190 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 27

Conread position: 393-587
Cow position: chr12:12637037-12637220 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 393-588
Cow position: chr12:42749591-42749402 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 27

Conread position: 394-581
Cow position: chr12:30919581-30919394 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 26

Conread position: 394-581
Cow position: chr12:43474905-43474729 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 394-588
Cow position: chr12:16056708-16056896 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 395-587
Cow position: chr12:19866390-19866202 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 27

Conread position: 402-584
Cow position: chr12:22894320-22894136 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 38

Conread position: 411-587
Cow position: chr12:21390004-21389834 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 417-588
Cow position: chr12:11836360-11836196 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 423-588
Cow position: chr12:4797428-4797262 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 22

Conread position: 429-588
Cow position: chr12:25445034-25444876 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 40

Conread position: 430-575
Cow position: chr12:35664073-35663938 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 430-581
Cow position: chr12:42254785-42254635 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 41

Conread position: 430-583
Cow position: chr12:32753635-32753480 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 430-587
Cow position: chr12:10895434-10895590 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 430-588
Cow position: chr12:7457425-7457581 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 39

Conread position: 430-588
Cow position: chr12:33323378-33323534 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 430-590
Cow position: chr12:14987916-14987754 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 38

Conread position: 432-581
Cow position: chr12:26868697-26868844 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 432-583
Cow position: chr12:15429480-15429629 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 56

Conread position: 432-588
Cow position: chr12:30661835-30661988 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 432-589
Cow position: chr12:41159704-41159551 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 434-580
Cow position: chr12:9914907-9914759 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 435-584
Cow position: chr12:18996922-18996776 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 444-583
Cow position: chr12:45014786-45014646 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 24

Conread position: 445-588
Cow position: chr12:25441747-25441602 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 68

Conread position: 445-588
Cow position: chr12:34465896-34466042 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 448-582
Cow position: chr12:7299355-7299492 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 448-588
Cow position: chr12:4866920-4866779 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 450-582
Cow position: chr12:24222422-24222553 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 450-584
Cow position: chr12:6226047-6226178 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 450-587
Cow position: chr12:11109853-11109717 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 18

Conread position: 450-591
Cow position: chr12:3950245-3950386 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 30

Conread position: 451-580
Cow position: chr12:38182591-38182465 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 451-583
Cow position: chr12:22859563-22859434 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 96

Conread position: 451-584
Cow position: chr12:29779815-29779948 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 451-588
Cow position: chr12:3879878-3880018 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr12:7000505-7000641 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 62

Conread position: 453-588
Cow position: chr12:3586214-3586080 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 453-588
Cow position: chr12:7920338-7920204 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 454-581
Cow position: chr12:27037355-27037481 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 458-587
Cow position: chr12:41474182-41474052 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 459-584
Cow position: chr12:28651203-28651079 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 459-584
Cow position: chr12:42143251-42143126 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 93

Conread position: 461-588
Cow position: chr12:17881951-17881823 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 462-588
Cow position: chr12:6210070-6210196 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 6

Conread position: 464-583
Cow position: chr12:42286057-42285937 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 464-583
Cow position: chr12:44559937-44559817 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 467-571
Cow position: chr12:23912928-23913032 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 467-577
Cow position: chr12:15173906-15173796 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 467-584
Cow position: chr12:25596718-25596604 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 467-585
Cow position: chr12:9439369-9439486 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 467-586
Cow position: chr12:45090269-45090386 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 467-588
Cow position: chr12:3197351-3197231 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 467-588
Cow position: chr12:44517655-44517776 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 470-583
Cow position: chr12:27572160-27572273 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 470-584
Cow position: chr12:30210563-30210449 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 470-588
Cow position: chr12:4793277-4793159 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 470-588
Cow position: chr12:24023722-24023840 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 470-588
Cow position: chr12:31517092-31517209 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 471-588
Cow position: chr12:47929279-47929163 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 472-588
Cow position: chr12:9229422-9229538 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 476-588
Cow position: chr12:4135151-4135039 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 486-584
Cow position: chr12:18963864-18963962 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 486-590
Cow position: chr12:44028574-44028467 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 492-588
Cow position: chr12:25452389-25452485 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.