Cow genome map

Conread name: reje28b_a18.y1

Conread position: 363-587
Cow position: chr18:3158400-3158629 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 59

Conread position: 370-554
Cow position: chr18:44548570-44548745 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 370-578
Cow position: chr18:26586436-26586637 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 378-542
Cow position: chr18:10757889-10758042 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 378-560
Cow position: chr18:104224-104044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 41

Conread position: 379-558
Cow position: chr18:42978465-42978648 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 41

Conread position: 380-564
Cow position: chr18:35857758-35857933 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 380-576
Cow position: chr18:41724648-41724839 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 31

Conread position: 380-581
Cow position: chr18:25598067-25598258 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 380-583
Cow position: chr18:55499236-55499044 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 380-588
Cow position: chr18:10656620-10656405 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 380-588
Cow position: chr18:51192582-51192773 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 381-588
Cow position: chr18:35888923-35889128 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 39

Conread position: 384-570
Cow position: chr18:37381929-37382108 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 36

Conread position: 384-588
Cow position: chr18:51691301-51691495 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 37

Conread position: 387-579
Cow position: chr18:8170932-8171109 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 387-583
Cow position: chr18:22789931-22790116 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 387-588
Cow position: chr18:247538-247721 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 387-588
Cow position: chr18:53642590-53642781 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 36

Conread position: 388-512
Cow position: chr18:38669665-38669785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 32

Conread position: 388-560
Cow position: chr18:22045253-22045418 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 388-568
Cow position: chr18:30341024-30341197 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 388-572
Cow position: chr18:33159101-33158925 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 388-572
Cow position: chr18:46276141-46276319 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 32

Conread position: 388-576
Cow position: chr18:18320390-18320577 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 35

Conread position: 388-577
Cow position: chr18:39097414-39097598 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 32

Conread position: 388-579
Cow position: chr18:44917912-44917733 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 388-580
Cow position: chr18:2773229-2773417 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 38

Conread position: 388-580
Cow position: chr18:2776732-2776920 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 38

Conread position: 388-580
Cow position: chr18:52649181-52649372 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 32

Conread position: 388-581
Cow position: chr18:41702992-41702811 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 388-582
Cow position: chr18:2108406-2108220 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 32

Conread position: 388-583
Cow position: chr18:1954422-1954617 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 32

Conread position: 388-583
Cow position: chr18:10977057-10977238 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 388-583
Cow position: chr18:18918805-18918986 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:22568910-22569094 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:28322811-28322629 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:31672360-31672540 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:38937978-38937793 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:43057051-43056871 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:45558301-45558119 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 167, 32

Conread position: 388-583
Cow position: chr18:46048912-46048724 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:47547824-47548014 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 23

Conread position: 388-583
Cow position: chr18:48407890-48407711 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 388-583
Cow position: chr18:49161142-49161331 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 80, 32

Conread position: 388-583
Cow position: chr18:49602884-49603071 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:50632287-50632470 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 388-583
Cow position: chr18:51178555-51178756 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 32

Conread position: 388-584
Cow position: chr18:11867496-11867308 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 142, 32

Conread position: 388-584
Cow position: chr18:21751538-21751346 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 35

Conread position: 388-584
Cow position: chr18:40759379-40759178 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 35

Conread position: 388-588
Cow position: chr18:1931301-1931487 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr18:2619048-2619246 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 28

Conread position: 388-588
Cow position: chr18:4851327-4851512 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 388-588
Cow position: chr18:5701422-5701216 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 32

Conread position: 388-588
Cow position: chr18:12584686-12584872 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 388-588
Cow position: chr18:20173979-20174162 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 388-588
Cow position: chr18:24343021-24342810 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 35

Conread position: 388-588
Cow position: chr18:24719467-24719280 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 33

Conread position: 388-588
Cow position: chr18:42427774-42427587 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 388-588
Cow position: chr18:43555355-43555557 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 32

Conread position: 388-590
Cow position: chr18:19809525-19809717 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 388-591
Cow position: chr18:50612358-50612569 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 46, 32

Conread position: 389-549
Cow position: chr18:44514247-44514092 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 31

Conread position: 389-564
Cow position: chr18:44044183-44044351 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 108, 31

Conread position: 389-567
Cow position: chr18:4000507-4000334 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-567
Cow position: chr18:52387061-52387232 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-569
Cow position: chr18:27637649-27637478 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 389-570
Cow position: chr18:5189534-5189708 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 389-570
Cow position: chr18:23652956-23653133 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 32

Conread position: 389-572
Cow position: chr18:35950202-35950018 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 33

Conread position: 389-573
Cow position: chr18:49280906-49281081 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 389-577
Cow position: chr18:29188552-29188364 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 31

Conread position: 389-581
Cow position: chr18:7956306-7956122 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 389-581
Cow position: chr18:8208266-8208451 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 31

Conread position: 389-582
Cow position: chr18:10051903-10051720 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 389-583
Cow position: chr18:11233578-11233386 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 31

Conread position: 389-583
Cow position: chr18:14172056-14172235 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 389-583
Cow position: chr18:39710272-39710080 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 389-583
Cow position: chr18:51757251-51757066 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 389-584
Cow position: chr18:237956-238145 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 389-584
Cow position: chr18:11330380-11330190 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 33

Conread position: 389-584
Cow position: chr18:53053072-53053263 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 31

Conread position: 389-585
Cow position: chr18:52251697-52251887 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr18:4495733-4495918 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr18:7963935-7963749 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 389-587
Cow position: chr18:7965389-7965200 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 31

Conread position: 389-587
Cow position: chr18:16659271-16659464 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 31

Conread position: 389-587
Cow position: chr18:18664208-18664405 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 31

Conread position: 389-587
Cow position: chr18:19868101-19868290 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 389-587
Cow position: chr18:21782842-21782659 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 389-587
Cow position: chr18:23649083-23648890 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 31

Conread position: 389-587
Cow position: chr18:29372027-29371835 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr18:38211316-38211129 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr18:39662938-39662747 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 31

Conread position: 389-587
Cow position: chr18:43283599-43283788 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 389-587
Cow position: chr18:44909209-44909021 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr18:3180567-3180378 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr18:5632422-5632235 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 389-588
Cow position: chr18:25757157-25757344 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr18:31159115-31159306 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 105, 31

Conread position: 389-588
Cow position: chr18:34490438-34490247 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 31

Conread position: 389-588
Cow position: chr18:37187837-37188030 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr18:47417157-47416969 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 389-588
Cow position: chr18:51405760-51405939 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 389-588
Cow position: chr18:55692975-55692783 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 389-590
Cow position: chr18:49040449-49040652 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 31

Conread position: 390-564
Cow position: chr18:44774091-44773922 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 24

Conread position: 390-571
Cow position: chr18:56463572-56463746 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 390-580
Cow position: chr18:9010861-9010683 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 390-583
Cow position: chr18:5647964-5647785 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 390-583
Cow position: chr18:46277126-46277314 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 30

Conread position: 390-587
Cow position: chr18:42290178-42290359 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 390-587
Cow position: chr18:42292906-42293087 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 390-588
Cow position: chr18:51643213-51643398 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 391-557
Cow position: chr18:47175223-47175383 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 391-571
Cow position: chr18:17195191-17195361 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 391-575
Cow position: chr18:24022770-24022598 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 391-581
Cow position: chr18:10214036-10214217 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 146, 29

Conread position: 391-581
Cow position: chr18:43950983-43950800 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 29

Conread position: 391-582
Cow position: chr18:39114963-39115145 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 391-583
Cow position: chr18:3097870-3098060 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 29

Conread position: 391-584
Cow position: chr18:12273809-12273629 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 391-584
Cow position: chr18:37023382-37023579 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 29

Conread position: 391-584
Cow position: chr18:39811428-39811612 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 30

Conread position: 391-584
Cow position: chr18:49970496-49970682 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 391-584
Cow position: chr18:52383062-52382875 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 29

Conread position: 391-587
Cow position: chr18:19796762-19796955 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 29

Conread position: 391-588
Cow position: chr18:3212035-3211845 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr18:24266248-24266440 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr18:31557002-31557193 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr18:40047349-40047531 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 391-588
Cow position: chr18:50359480-50359299 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 392-570
Cow position: chr18:48112812-48112982 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 392-571
Cow position: chr18:39860624-39860787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 392-580
Cow position: chr18:6470246-6470070 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 392-588
Cow position: chr18:11657813-11657624 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 392-588
Cow position: chr18:26999043-26998850 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 28

Conread position: 392-588
Cow position: chr18:42719837-42720023 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 25

Conread position: 393-582
Cow position: chr18:53092861-53093045 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 10

Conread position: 393-583
Cow position: chr18:4489748-4489936 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 27

Conread position: 393-587
Cow position: chr18:19765339-19765157 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 393-587
Cow position: chr18:22120732-22120917 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 393-588
Cow position: chr18:7109284-7109097 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 393-588
Cow position: chr18:47486199-47486011 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 394-583
Cow position: chr18:35874230-35874050 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 26

Conread position: 394-587
Cow position: chr18:55747840-55747654 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 394-588
Cow position: chr18:39623956-39623767 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 395-568
Cow position: chr18:16382012-16381845 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 396-588
Cow position: chr18:4757884-4758065 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 397-588
Cow position: chr18:24759510-24759689 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 398-587
Cow position: chr18:50974137-50974326 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 22

Conread position: 400-582
Cow position: chr18:23446913-23447088 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 400-584
Cow position: chr18:45186021-45185843 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 407-588
Cow position: chr18:39434971-39434794 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 5, 17

Conread position: 407-588
Cow position: chr18:51675945-51676122 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 13

Conread position: 408-584
Cow position: chr18:23821691-23821861 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 414-583
Cow position: chr18:2774004-2774166 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 422-583
Cow position: chr18:21266637-21266478 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 17

Conread position: 428-582
Cow position: chr18:22214611-22214461 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 430-583
Cow position: chr18:52414095-52413938 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 430-588
Cow position: chr18:11754254-11754097 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 432-573
Cow position: chr18:24508105-24508249 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 432-574
Cow position: chr18:23898535-23898399 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 432-588
Cow position: chr18:48962058-48961901 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 36

Conread position: 435-584
Cow position: chr18:32600176-32600023 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 33

Conread position: 435-587
Cow position: chr18:47835943-47835793 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 441-587
Cow position: chr18:29080920-29080775 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 445-582
Cow position: chr18:28297756-28297889 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 23

Conread position: 445-588
Cow position: chr18:27109184-27109325 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 446-583
Cow position: chr18:21192307-21192441 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 451-575
Cow position: chr18:51392540-51392661 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 451-584
Cow position: chr18:49982835-49982701 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 451-588
Cow position: chr18:7359849-7359712 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 7

Conread position: 451-588
Cow position: chr18:19896346-19896484 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 452-566
Cow position: chr18:55123351-55123234 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 452-575
Cow position: chr18:21768717-21768594 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 28

Conread position: 452-588
Cow position: chr18:5078672-5078806 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 452-588
Cow position: chr18:38757735-38757871 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 27

Conread position: 453-571
Cow position: chr18:52625360-52625480 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 453-588
Cow position: chr18:24529771-24529902 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 454-588
Cow position: chr18:4466884-4467019 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 454-588
Cow position: chr18:16997354-16997221 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 454-588
Cow position: chr18:19883633-19883499 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 89, 14

Conread position: 456-582
Cow position: chr18:53962330-53962453 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 458-584
Cow position: chr18:19433858-19433734 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 459-575
Cow position: chr18:52589872-52589987 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 459-584
Cow position: chr18:39460317-39460191 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 461-582
Cow position: chr18:56166076-56165955 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 103

Conread position: 462-587
Cow position: chr18:14586378-14586502 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 463-583
Cow position: chr18:45985533-45985653 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 17

Conread position: 467-581
Cow position: chr18:5711565-5711677 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 467-582
Cow position: chr18:17005349-17005233 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 467-582
Cow position: chr18:19273008-19273123 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 467-583
Cow position: chr18:30586137-30586249 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 467-584
Cow position: chr18:25282467-25282582 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 467-588
Cow position: chr18:4203842-4203961 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 467-588
Cow position: chr18:47410631-47410510 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 467-588
Cow position: chr18:56159549-56159429 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 467-589
Cow position: chr18:52658744-52658623 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 470-584
Cow position: chr18:39168616-39168503 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 470-588
Cow position: chr18:46072548-46072430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 471-577
Cow position: chr18:4624066-4624172 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 471-582
Cow position: chr18:36746175-36746286 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 472-588
Cow position: chr18:27388666-27388551 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 42

Conread position: 475-588
Cow position: chr18:47525488-47525375 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.