Non-Coding RNA Search

Cow genome map


           Conread name:
           reje34b_d9.y1
        

               Conread position:
               160-393
               

               Cow position:
               chr11:31874963-31875198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               168-382
               

               Cow position:
               chr11:26845721-26845500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               168-382
               

               Cow position:
               chr11:71341592-71341370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               168-436
               

               Cow position:
               chr11:69119163-69119437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               170-339
               

               Cow position:
               chr11:12368576-12368752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               171-373
               

               Cow position:
               chr11:52983554-52983761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               171-382
               

               Cow position:
               chr11:9221850-9221637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               171-385
               

               Cow position:
               chr11:58990384-58990590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               64, 137
               

               Conread position:
               171-393
               

               Cow position:
               chr11:5790011-5789794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               171-407
               

               Cow position:
               chr11:17831343-17831104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 127
               

               Conread position:
               171-423
               

               Cow position:
               chr11:83230517-83230267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               171-433
               

               Cow position:
               chr11:7002055-7001785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               30, 158
               

               Conread position:
               171-436
               

               Cow position:
               chr11:41272015-41272285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               172-361
               

               Cow position:
               chr11:80520840-80521023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               172-431
               

               Cow position:
               chr11:62215305-62215050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               129, 18
               

               Conread position:
               172-436
               

               Cow position:
               chr11:30354936-30355213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               172-436
               

               Cow position:
               chr11:47125426-47125691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               172-436
               

               Cow position:
               chr11:71009020-71009274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               173-393
               

               Cow position:
               chr11:3393329-3393104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               173-436
               

               Cow position:
               chr11:6194288-6194555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               174-393
               

               Cow position:
               chr11:40608715-40608489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               174-436
               

               Cow position:
               chr11:42519624-42519879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               175-382
               

               Cow position:
               chr11:27907675-27907869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               175-390
               

               Cow position:
               chr11:34829899-34829683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 137
               

               Conread position:
               176-363
               

               Cow position:
               chr11:75965765-75965576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 6
               

               Conread position:
               176-410
               

               Cow position:
               chr11:20491456-20491688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               176-421
               

               Cow position:
               chr11:30210791-30211042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               177-436
               

               Cow position:
               chr11:59366191-59365927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               178-390
               

               Cow position:
               chr11:63999204-63998989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               179-385
               

               Cow position:
               chr11:38236138-38236347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 131
               

               Conread position:
               179-436
               

               Cow position:
               chr11:35881805-35882058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               180-382
               

               Cow position:
               chr11:33310861-33311072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               182-360
               

               Cow position:
               chr11:49231764-49231946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 127
               

               Conread position:
               182-412
               

               Cow position:
               chr11:18144926-18144695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               182-433
               

               Cow position:
               chr11:67871714-67871459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               183-347
               

               Cow position:
               chr11:71168697-71168530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               183-372
               

               Cow position:
               chr11:44642395-44642207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               183-388
               

               Cow position:
               chr11:46952847-46953048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               183-405
               

               Cow position:
               chr11:46746524-46746755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 229
               

               Conread position:
               183-418
               

               Cow position:
               chr11:52832826-52832592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 128
               

               Conread position:
               184-362
               

               Cow position:
               chr11:16262136-16261950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               31, 134
               

               Conread position:
               184-374
               

               Cow position:
               chr11:72333486-72333675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               184-375
               

               Cow position:
               chr11:47772499-47772302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               184-382
               

               Cow position:
               chr11:83033345-83033145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               184-383
               

               Cow position:
               chr11:41986152-41985950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               184-405
               

               Cow position:
               chr11:18509125-18508912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               184-419
               

               Cow position:
               chr11:34962956-34963198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 137
               

               Conread position:
               184-422
               

               Cow position:
               chr11:82108002-82107767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               184-436
               

               Cow position:
               chr11:49152843-49153107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               184-436
               

               Cow position:
               chr11:63920155-63919900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               196, 37
               

               Conread position:
               185-311
               

               Cow position:
               chr11:21428100-21427968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               185-314
               

               Cow position:
               chr11:81174783-81174911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               185-326
               

               Cow position:
               chr11:48042143-48041994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               185-347
               

               Cow position:
               chr11:38874510-38874342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               185-353
               

               Cow position:
               chr11:42003051-42002881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               185-355
               

               Cow position:
               chr11:36286589-36286763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               185-365
               

               Cow position:
               chr11:45898160-45897972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               185-367
               

               Cow position:
               chr11:51144608-51144793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               185-373
               

               Cow position:
               chr11:42066753-42066950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               185-373
               

               Cow position:
               chr11:67747177-67747370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               185-374
               

               Cow position:
               chr11:23128650-23128453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               185-375
               

               Cow position:
               chr11:3833460-3833276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               185-375
               

               Cow position:
               chr11:33341254-33341057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               185-376
               

               Cow position:
               chr11:33348291-33348099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               185-378
               

               Cow position:
               chr11:13499909-13500106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               185-378
               

               Cow position:
               chr11:50072841-50073028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               185-382
               

               Cow position:
               chr11:377751-377547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               185-382
               

               Cow position:
               chr11:3233978-3234170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               185-382
               

               Cow position:
               chr11:5031881-5031681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               185-382
               

               Cow position:
               chr11:7590087-7590283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               185-382
               

               Cow position:
               chr11:9270833-9270632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               185-382
               

               Cow position:
               chr11:13592631-13592830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               185-382
               

               Cow position:
               chr11:15772822-15772619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               185-382
               

               Cow position:
               chr11:17278771-17278581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               185-382
               

               Cow position:
               chr11:17321553-17321744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               185-382
               

               Cow position:
               chr11:23232623-23232425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               185-382
               

               Cow position:
               chr11:26144203-26144001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               185-382
               

               Cow position:
               chr11:29659455-29659654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               185-382
               

               Cow position:
               chr11:34113156-34113360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               185-382
               

               Cow position:
               chr11:35684602-35684406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               185-382
               

               Cow position:
               chr11:36658928-36658729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               185-382
               

               Cow position:
               chr11:46998877-46999073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 118
               

               Conread position:
               185-382
               

               Cow position:
               chr11:48649874-48650067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               185-382
               

               Cow position:
               chr11:56518416-56518217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               185-382
               

               Cow position:
               chr11:63435410-63435615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               185-382
               

               Cow position:
               chr11:64868122-64867926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               185-382
               

               Cow position:
               chr11:66188430-66188223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 136
               

               Conread position:
               185-382
               

               Cow position:
               chr11:68913035-68913235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               185-382
               

               Cow position:
               chr11:71501239-71501038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 130
               

               Conread position:
               185-382
               

               Cow position:
               chr11:71868711-71868509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               185-382
               

               Cow position:
               chr11:83066387-83066582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               185-383
               

               Cow position:
               chr11:38334419-38334619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               185-385
               

               Cow position:
               chr11:4663153-4662949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               185-385
               

               Cow position:
               chr11:6233987-6233782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               185-385
               

               Cow position:
               chr11:11125555-11125761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 131
               

               Conread position:
               185-385
               

               Cow position:
               chr11:32436226-32436431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               54, 126
               

               Conread position:
               185-385
               

               Cow position:
               chr11:33345336-33345544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               185-385
               

               Cow position:
               chr11:36799409-36799209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               185-385
               

               Cow position:
               chr11:44636865-44636656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               185-385
               

               Cow position:
               chr11:71492962-71492763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               185-385
               

               Cow position:
               chr11:77758863-77758663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               185-385
               

               Cow position:
               chr11:84228819-84228620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               185-386
               

               Cow position:
               chr11:8148006-8147799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               185-386
               

               Cow position:
               chr11:52297328-52297122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               185-387
               

               Cow position:
               chr11:20602122-20602326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               185-388
               

               Cow position:
               chr11:2084034-2084244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               185-388
               

               Cow position:
               chr11:8545120-8544917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               185-390
               

               Cow position:
               chr11:30475896-30476101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               185-390
               

               Cow position:
               chr11:37804661-37804451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 130
               

               Conread position:
               185-390
               

               Cow position:
               chr11:76606570-76606775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 124
               

               Conread position:
               185-391
               

               Cow position:
               chr11:34032309-34032095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               185-391
               

               Cow position:
               chr11:40573440-40573232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               185-393
               

               Cow position:
               chr11:16907151-16906945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               185-393
               

               Cow position:
               chr11:17493371-17493588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 189
               

               Conread position:
               185-393
               

               Cow position:
               chr11:36238676-36238883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               185-393
               

               Cow position:
               chr11:47837208-47837425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               185-393
               

               Cow position:
               chr11:52690629-52690416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               185-393
               

               Cow position:
               chr11:53778508-53778722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               185-393
               

               Cow position:
               chr11:54334226-54334434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               185-393
               

               Cow position:
               chr11:59872824-59873033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               185-393
               

               Cow position:
               chr11:61958852-61958639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               185-393
               

               Cow position:
               chr11:63847741-63847950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               185-393
               

               Cow position:
               chr11:65607798-65607583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               185-393
               

               Cow position:
               chr11:70278215-70278007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               185-393
               

               Cow position:
               chr11:72375793-72375570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 132
               

               Conread position:
               185-393
               

               Cow position:
               chr11:76114547-76114748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               185-393
               

               Cow position:
               chr11:83925945-83926148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 97
               

               Conread position:
               185-396
               

               Cow position:
               chr11:16540754-16540972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               185-399
               

               Cow position:
               chr11:49148932-49149160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               185-399
               

               Cow position:
               chr11:70756374-70756590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               185-401
               

               Cow position:
               chr11:44031895-44032125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               185-405
               

               Cow position:
               chr11:372802-372592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               195, 49
               

               Conread position:
               185-405
               

               Cow position:
               chr11:4207205-4207427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 128
               

               Conread position:
               185-406
               

               Cow position:
               chr11:77705648-77705869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               185-407
               

               Cow position:
               chr11:30954892-30955119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               185-407
               

               Cow position:
               chr11:42044097-42043878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               185-407
               

               Cow position:
               chr11:66572608-66572379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               185-412
               

               Cow position:
               chr11:48306453-48306224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               185-416
               

               Cow position:
               chr11:28395363-28395603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               185-421
               

               Cow position:
               chr11:49934844-49934591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               21, 136
               

               Conread position:
               185-424
               

               Cow position:
               chr11:3739846-3740092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 130
               

               Conread position:
               185-432
               

               Cow position:
               chr11:18698770-18699033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               185-433
               

               Cow position:
               chr11:58588240-58588491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               185-433
               

               Cow position:
               chr11:61348782-61349015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               185-436
               

               Cow position:
               chr11:11752625-11752369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               185-436
               

               Cow position:
               chr11:18572694-18572950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               185-436
               

               Cow position:
               chr11:21136705-21136961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 117
               

               Conread position:
               185-436
               

               Cow position:
               chr11:21852411-21852149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               185-436
               

               Cow position:
               chr11:28993839-28993581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               185-436
               

               Cow position:
               chr11:32439059-32438805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               185-436
               

               Cow position:
               chr11:43646518-43646263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               185-436
               

               Cow position:
               chr11:45631869-45631613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               185-436
               

               Cow position:
               chr11:54134179-54133940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               185-436
               

               Cow position:
               chr11:55761763-55762024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               185-436
               

               Cow position:
               chr11:56821356-56821095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 136
               

               Conread position:
               185-436
               

               Cow position:
               chr11:57873722-57873975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               185-436
               

               Cow position:
               chr11:63469769-63470024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 129
               

               Conread position:
               185-436
               

               Cow position:
               chr11:64638636-64638389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               185-436
               

               Cow position:
               chr11:71806251-71805999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               185-436
               

               Cow position:
               chr11:77683060-77683319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               186-355
               

               Cow position:
               chr11:40258514-40258344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 110
               

               Conread position:
               186-356
               

               Cow position:
               chr11:70273199-70273375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               186-369
               

               Cow position:
               chr11:21438109-21438290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               186-372
               

               Cow position:
               chr11:56654442-56654640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 136
               

               Conread position:
               186-375
               

               Cow position:
               chr11:83032577-83032768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               186-382
               

               Cow position:
               chr11:14466595-14466392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               186-382
               

               Cow position:
               chr11:42296724-42296525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               186-382
               

               Cow position:
               chr11:48272091-48272295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               186-382
               

               Cow position:
               chr11:62789024-62789225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               186-382
               

               Cow position:
               chr11:86720519-86720323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               186-389
               

               Cow position:
               chr11:43360890-43360681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 110
               

               Conread position:
               186-390
               

               Cow position:
               chr11:73354160-73353958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               186-393
               

               Cow position:
               chr11:23586531-23586742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               186-393
               

               Cow position:
               chr11:63482532-63482323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               186-393
               

               Cow position:
               chr11:80530261-80530464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               186-394
               

               Cow position:
               chr11:53147643-53147425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               186-394
               

               Cow position:
               chr11:85294140-85294348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 51
               

               Conread position:
               186-422
               

               Cow position:
               chr11:249591-249352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               186-435
               

               Cow position:
               chr11:14941697-14941464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               186-436
               

               Cow position:
               chr11:30934318-30934559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               186-436
               

               Cow position:
               chr11:55494573-55494831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 129
               

               Conread position:
               186-436
               

               Cow position:
               chr11:67600675-67600945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 132
               

               Conread position:
               186-436
               

               Cow position:
               chr11:75874858-75874605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               187-370
               

               Cow position:
               chr11:43430560-43430374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 124
               

               Conread position:
               187-382
               

               Cow position:
               chr11:8988334-8988137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               187-385
               

               Cow position:
               chr11:48474598-48474802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               187-393
               

               Cow position:
               chr11:34646486-34646695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               187-399
               

               Cow position:
               chr11:70978832-70978626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               187-405
               

               Cow position:
               chr11:13043251-13043031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               187-405
               

               Cow position:
               chr11:35775233-35775454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               187-405
               

               Cow position:
               chr11:40459008-40459225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               187-405
               

               Cow position:
               chr11:59702381-59702608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               187-405
               

               Cow position:
               chr11:84385741-84385522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               187-408
               

               Cow position:
               chr11:40478955-40478732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               187-433
               

               Cow position:
               chr11:19586353-19586605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               187-433
               

               Cow position:
               chr11:47193414-47193658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               187-436
               

               Cow position:
               chr11:38639014-38639266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               187-436
               

               Cow position:
               chr11:51729183-51729441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               187-436
               

               Cow position:
               chr11:63157014-63156777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               188-364
               

               Cow position:
               chr11:55203561-55203383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               188-386
               

               Cow position:
               chr11:30639044-30638850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               192, 49
               

               Conread position:
               189-370
               

               Cow position:
               chr11:19946335-19946517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               189-386
               

               Cow position:
               chr11:62620276-62620475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               190-382
               

               Cow position:
               chr11:261365-261173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               190-382
               

               Cow position:
               chr11:31227866-31228057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               190-389
               

               Cow position:
               chr11:67246690-67246887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               190-400
               

               Cow position:
               chr11:80413114-80412900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               190-421
               

               Cow position:
               chr11:77546315-77546553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               190-431
               

               Cow position:
               chr11:63434158-63433904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               191-382
               

               Cow position:
               chr11:5201747-5201558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               191-382
               

               Cow position:
               chr11:39060702-39060508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 123
               

               Conread position:
               191-393
               

               Cow position:
               chr11:55052779-55052977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               192-436
               

               Cow position:
               chr11:42083372-42083620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               194-370
               

               Cow position:
               chr11:13040262-13040089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               194-382
               

               Cow position:
               chr11:55744373-55744562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               194-382
               

               Cow position:
               chr11:73512535-73512349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               194-392
               

               Cow position:
               chr11:22499462-22499263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               194-393
               

               Cow position:
               chr11:6633607-6633816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               194-393
               

               Cow position:
               chr11:41293916-41293712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 121
               

               Conread position:
               194-420
               

               Cow position:
               chr11:8840842-8840626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               194-432
               

               Cow position:
               chr11:17227733-17227488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               194-433
               

               Cow position:
               chr11:12111552-12111312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               194-436
               

               Cow position:
               chr11:39462525-39462786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               194-436
               

               Cow position:
               chr11:50937846-50937591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               194-436
               

               Cow position:
               chr11:69810802-69811048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               43, 123
               

               Conread position:
               195-388
               

               Cow position:
               chr11:33409355-33409162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               198-436
               

               Cow position:
               chr11:36647265-36647494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               194, 39
               

               Conread position:
               199-419
               

               Cow position:
               chr11:63687707-63687485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               183, 107
               

               Conread position:
               201-352
               

               Cow position:
               chr11:61858992-61858838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               201-376
               

               Cow position:
               chr11:33526964-33527141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               201-381
               

               Cow position:
               chr11:41809569-41809399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               201-382
               

               Cow position:
               chr11:17676460-17676278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               201-382
               

               Cow position:
               chr11:35536498-35536681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               201-382
               

               Cow position:
               chr11:40792797-40792610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               201-382
               

               Cow position:
               chr11:62742723-62742551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               201-384
               

               Cow position:
               chr11:4199183-4199366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 111
               

               Conread position:
               201-384
               

               Cow position:
               chr11:65826831-65826655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               201-385
               

               Cow position:
               chr11:35803044-35803235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               201-385
               

               Cow position:
               chr11:70206232-70206416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               201-386
               

               Cow position:
               chr11:47004252-47004443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               201-388
               

               Cow position:
               chr11:42359023-42359221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               201-393
               

               Cow position:
               chr11:4653067-4652867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               201-393
               

               Cow position:
               chr11:63909749-63909561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               201-394
               

               Cow position:
               chr11:7013833-7013640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               201-436
               

               Cow position:
               chr11:9368737-9368973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               201-436
               

               Cow position:
               chr11:31506755-31506995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               201-436
               

               Cow position:
               chr11:41603779-41603534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               201-436
               

               Cow position:
               chr11:54244589-54244820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               202-381
               

               Cow position:
               chr11:32398548-32398729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               202-393
               

               Cow position:
               chr11:62778358-62778547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               202-393
               

               Cow position:
               chr11:67804665-67804848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               202-399
               

               Cow position:
               chr11:77128564-77128772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               202-412
               

               Cow position:
               chr11:6202358-6202566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               145, 107
               

               Conread position:
               204-376
               

               Cow position:
               chr11:36986869-36987038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               204-382
               

               Cow position:
               chr11:3282947-3283118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               205-378
               

               Cow position:
               chr11:63917557-63917386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               205-433
               

               Cow position:
               chr11:84890806-84890564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               205-436
               

               Cow position:
               chr11:27565250-27565483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               206-382
               

               Cow position:
               chr11:15373763-15373934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               163, 29
               

               Conread position:
               206-393
               

               Cow position:
               chr11:79019145-79018953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               206-405
               

               Cow position:
               chr11:22747414-22747215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 100
               

               Conread position:
               207-377
               

               Cow position:
               chr11:41313740-41313567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               208-373
               

               Cow position:
               chr11:27765068-27765239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 108
               

               Conread position:
               208-385
               

               Cow position:
               chr11:2344171-2344350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               208-393
               

               Cow position:
               chr11:63866737-63866553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               209-436
               

               Cow position:
               chr11:16342312-16342081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               210-385
               

               Cow position:
               chr11:36112345-36112517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               210-393
               

               Cow position:
               chr11:70825870-70826054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               211-436
               

               Cow position:
               chr11:18785951-18785729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 95
               

               Conread position:
               212-386
               

               Cow position:
               chr11:17721883-17721703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               213-418
               

               Cow position:
               chr11:61427522-61427722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               213-431
               

               Cow position:
               chr11:64048328-64048552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               220-374
               

               Cow position:
               chr11:7414938-7414789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               225-420
               

               Cow position:
               chr11:23767373-23767189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               227-385
               

               Cow position:
               chr11:16320227-16320381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               228-422
               

               Cow position:
               chr11:34692796-34692984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               165, 14
               

               Conread position:
               230-374
               

               Cow position:
               chr11:69652836-69652695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               230-408
               

               Cow position:
               chr11:69307457-69307633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr11:36920633-36920480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               232-385
               

               Cow position:
               chr11:81762810-81762966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               233-364
               

               Cow position:
               chr11:34106721-34106593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               233-382
               

               Cow position:
               chr11:30925104-30925249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               233-393
               

               Cow position:
               chr11:62609553-62609710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               234-393
               

               Cow position:
               chr11:82731050-82730892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-364
               

               Cow position:
               chr11:71482329-71482456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               235-385
               

               Cow position:
               chr11:21910678-21910529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               235-436
               

               Cow position:
               chr11:27681453-27681648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               130, 10
               

               Conread position:
               237-393
               

               Cow position:
               chr11:56290462-56290617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               237-436
               

               Cow position:
               chr11:16232986-16232787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 72
               

               Conread position:
               237-436
               

               Cow position:
               chr11:63484897-63485099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               155, 34
               

               Conread position:
               238-382
               

               Cow position:
               chr11:84977406-84977263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               109, 6
               

               Conread position:
               238-388
               

               Cow position:
               chr11:61454561-61454416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               238-397
               

               Cow position:
               chr11:71110844-71111001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               239-433
               

               Cow position:
               chr11:50953610-50953419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               240-436
               

               Cow position:
               chr11:19501923-19502115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               241-407
               

               Cow position:
               chr11:897628-897792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               242-382
               

               Cow position:
               chr11:27913240-27913379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               242-382
               

               Cow position:
               chr11:39249928-39250066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               242-409
               

               Cow position:
               chr11:18587640-18587473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               136, 67
               

               Conread position:
               242-436
               

               Cow position:
               chr11:18914981-18915177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               242-436
               

               Cow position:
               chr11:27462142-27461944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               244-382
               

               Cow position:
               chr11:35669994-35669858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               244-385
               

               Cow position:
               chr11:71345366-71345225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 65
               

               Conread position:
               244-393
               

               Cow position:
               chr11:10127705-10127557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               244-393
               

               Cow position:
               chr11:58173583-58173730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               244-436
               

               Cow position:
               chr11:11785290-11785480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 65
               

               Conread position:
               247-388
               

               Cow position:
               chr11:15683018-15682879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               249-436
               

               Cow position:
               chr11:14046113-14045932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               250-396
               

               Cow position:
               chr11:53717843-53717698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               250-429
               

               Cow position:
               chr11:29786535-29786360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               250-433
               

               Cow position:
               chr11:27449647-27449468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               250-433
               

               Cow position:
               chr11:46427444-46427265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               250-433
               

               Cow position:
               chr11:72869854-72869677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               252-382
               

               Cow position:
               chr11:29946948-29946819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               252-386
               

               Cow position:
               chr11:81728681-81728550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               253-382
               

               Cow position:
               chr11:67312747-67312875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               253-436
               

               Cow position:
               chr11:19606285-19606459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               255-393
               

               Cow position:
               chr11:84775044-84775179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               261-436
               

               Cow position:
               chr11:79884463-79884642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               262-382
               

               Cow position:
               chr11:32782908-32782789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               266-436
               

               Cow position:
               chr11:27661396-27661566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               267-427
               

               Cow position:
               chr11:78818221-78818376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               268-436
               

               Cow position:
               chr11:2419758-2419918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               271-415
               

               Cow position:
               chr11:74720709-74720852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               271-436
               

               Cow position:
               chr11:9699260-9699088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               271-436
               

               Cow position:
               chr11:33993149-33993323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               272-432
               

               Cow position:
               chr11:62016019-62015862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               273-436
               

               Cow position:
               chr11:48900858-48900692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               115, 36
               

               Conread position:
               274-393
               

               Cow position:
               chr11:79707701-79707815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               276-436
               

               Cow position:
               chr11:24216132-24216284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               279-431
               

               Cow position:
               chr11:45671377-45671218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 30
               

               Conread position:
               279-436
               

               Cow position:
               chr11:6729660-6729815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               280-436
               

               Cow position:
               chr11:17559124-17559282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               281-386
               

               Cow position:
               chr11:22468679-22468783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               281-423
               

               Cow position:
               chr11:30306425-30306563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               130, 11
               

               Conread position:
               283-436
               

               Cow position:
               chr11:29978340-29978186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               283-436
               

               Cow position:
               chr11:34136499-34136649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               286-436
               

               Cow position:
               chr11:25320185-25320331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               286-436
               

               Cow position:
               chr11:58185882-58186039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               292-421
               

               Cow position:
               chr11:45553765-45553890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               301-436
               

               Cow position:
               chr11:22009372-22009239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               334-436
               

               Cow position:
               chr11:9898214-9898319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.
Conread position:	160-393
Cow position:	chr11:31874963-31875198 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	167
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	48, 23
Conread position:	168-382
Cow position:	chr11:26845721-26845500 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	161
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	19, 150
Conread position:	168-436
Cow position:	chr11:69119163-69119437 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	194
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	20, 153
Conread position:	170-339
Cow position:	chr11:12368576-12368752 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	132
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	63, 147
Conread position:	171-373
Cow position:	chr11:52983554-52983761 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	162
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	15, 143
Conread position:	171-382
Cow position:	chr11:9221850-9221637 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	163
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	15, 69
Conread position:	171-385
Cow position:	chr11:58990384-58990590 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	155
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	64, 137
Conread position:	171-393
Cow position:	chr11:5790011-5789794 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	153
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	18, 63
Conread position:	171-407
Cow position:	chr11:17831343-17831104 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	175
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	20, 127
Conread position:	171-423
Cow position:	chr11:83230517-83230267 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	185
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	33, 23
Conread position:	171-433
Cow position:	chr11:7002055-7001785 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	190
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	30, 158
Conread position:	171-436
Cow position:	chr11:41272015-41272285 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	201
Alignm E-value:	3.00004e-41
Alignm gaps (pig, cow):	33, 19
Conread position:	172-361
Cow position:	chr11:80520840-80521023 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	145
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	32, 17
Conread position:	172-431
Cow position:	chr11:62215305-62215050 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	171
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	129, 18
Conread position:	172-436
Cow position:	chr11:30354936-30355213 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	194
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	24, 64
Conread position:	173-393
Cow position:	chr11:3393329-3393104 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	160
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	60, 143
Conread position:	173-436
Cow position:	chr11:6194288-6194555 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	202
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	31, 96
Conread position:	174-393
Cow position:	chr11:40608715-40608489 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	161
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	30, 144
Conread position:	174-436
Cow position:	chr11:42519624-42519879 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	188
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	59, 10
Conread position:	175-382
Cow position:	chr11:27907675-27907869 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	153
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	11, 59