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Cow genome map

           
Conread name:
           
reje34b_d9.y1
        

               
Conread position:
               
168-386
               

               
Cow position:
               
chr14:13426995-13426777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
168-393
               

               
Cow position:
               
chr14:16834473-16834243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
171-382
               

               
Cow position:
               
chr14:19863286-19863504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
171-433
               

               
Cow position:
               
chr14:26108776-26108514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
171-436
               

               
Cow position:
               
chr14:44861092-44861354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr14:23478963-23478749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
172-393
               

               
Cow position:
               
chr14:10078412-10078186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
173-393
               

               
Cow position:
               
chr14:34331182-34331407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr14:43031943-43031678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
173-436
               

               
Cow position:
               
chr14:11615074-11615344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr14:25903664-25903457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 26
               

               
Conread position:
               
175-436
               

               
Cow position:
               
chr14:21018254-21017993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr14:41180568-41180772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr14:28326998-28327195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
176-436
               

               
Cow position:
               
chr14:7647891-7648142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
176-436
               

               
Cow position:
               
chr14:20045692-20045429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
177-384
               

               
Cow position:
               
chr14:33456903-33457115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
177-393
               

               
Cow position:
               
chr14:48740733-48740948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr14:41210992-41210784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
179-436
               

               
Cow position:
               
chr14:46998175-46997911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr14:45605225-45605028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
182-405
               

               
Cow position:
               
chr14:40165557-40165332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr14:18763312-18763497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr14:15039481-15039683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr14:27275289-27275094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
184-374
               

               
Cow position:
               
chr14:25403805-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr14:6541593-6541796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr14:8101922-8101723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
184-385
               

               
Cow position:
               
chr14:42419143-42419344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
184-386
               

               
Cow position:
               
chr14:1708526-1708730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
184-386
               

               
Cow position:
               
chr14:20712557-20712761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
185-317
               

               
Cow position:
               
chr14:33828292-33828157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
185-350
               

               
Cow position:
               
chr14:3564413-3564246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
185-367
               

               
Cow position:
               
chr14:12856731-12856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 131
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr14:5573072-5572885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
185-370
               

               
Cow position:
               
chr14:41471840-41472028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr14:8784314-8784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr14:33830428-33830239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
185-377
               

               
Cow position:
               
chr14:26655000-26655199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
185-378
               

               
Cow position:
               
chr14:1977939-1978139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
185-378
               

               
Cow position:
               
chr14:46685430-46685241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
185-378
               

               
Cow position:
               
chr14:48412748-48412948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
185-380
               

               
Cow position:
               
chr14:34355562-34355778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:7036223-7036427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:11056608-11056800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:17841157-17841361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:19129641-19129436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:24387580-24387371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:28115054-28115256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:28378492-28378289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:33309375-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:39434128-39434327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr14:47672754-47672951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
185-383
               

               
Cow position:
               
chr14:19394491-19394292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
185-384
               

               
Cow position:
               
chr14:39926333-39926139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr14:16549872-16550077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr14:20600517-20600311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr14:21535189-21535380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr14:4202962-4203173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr14:14622048-14622250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
185-391
               

               
Cow position:
               
chr14:22966884-22966678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr14:5630293-5630082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr14:12634755-12634962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr14:19618619-19618831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
185-397
               

               
Cow position:
               
chr14:37422656-37422867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr14:22941590-22941816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr14:14466345-14466542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr14:19951701-19951479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr14:34983995-34983780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
185-401
               

               
Cow position:
               
chr14:35420631-35420855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr14:24981586-24981367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr14:24236955-24236726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr14:37447338-37447564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-414
               

               
Cow position:
               
chr14:1868252-1868484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
185-415
               

               
Cow position:
               
chr14:30662118-30661895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
185-424
               

               
Cow position:
               
chr14:42330483-42330244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
185-426
               

               
Cow position:
               
chr14:1859484-1859728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr14:18904480-18904726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr14:36555026-36555268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr14:37884281-37884519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
185-434
               

               
Cow position:
               
chr14:14187464-14187206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
185-435
               

               
Cow position:
               
chr14:12511770-12512031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:10858563-10858299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:18309165-18309441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:22381420-22381694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:23424389-23424124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:23443150-23442885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:33247302-33247561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:36289669-36289932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:37678870-37679125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:38355318-38355067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 100
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:39037366-39037098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:40754112-40754385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:41252857-41253120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr14:45849088-45849339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr14:41302701-41302885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 127
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr14:38338016-38338190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
186-373
               

               
Cow position:
               
chr14:10630994-10631180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr14:34199718-34199917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr14:44258058-44257850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 135
               

               
Conread position:
               
186-404
               

               
Cow position:
               
chr14:29698227-29698453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
186-422
               

               
Cow position:
               
chr14:49021771-49022010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
186-433
               

               
Cow position:
               
chr14:47027237-47027491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr14:41128025-41127765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
187-422
               

               
Cow position:
               
chr14:42437157-42436917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
187-426
               

               
Cow position:
               
chr14:23107457-23107211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
187-433
               

               
Cow position:
               
chr14:15990337-15990105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
187-434
               

               
Cow position:
               
chr14:46654414-46654668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr14:1868668-1868929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr14:13810067-13809813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr14:35503494-35503222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
188-381
               

               
Cow position:
               
chr14:6735730-6735932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
188-436
               

               
Cow position:
               
chr14:23050506-23050734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr14:37883786-37883986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
190-374
               

               
Cow position:
               
chr14:39778882-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
190-381
               

               
Cow position:
               
chr14:35018628-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr14:21933214-21933413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
190-436
               

               
Cow position:
               
chr14:12127285-12127538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
190-436
               

               
Cow position:
               
chr14:16256893-16256633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
192-384
               

               
Cow position:
               
chr14:26097569-26097764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
194-374
               

               
Cow position:
               
chr14:40034102-40033933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr14:4282385-4282584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
194-421
               

               
Cow position:
               
chr14:2038692-2038919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
194-434
               

               
Cow position:
               
chr14:25385763-25386006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr14:2189755-2189513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr14:5836030-5835789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr14:7959898-7959657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr14:33773927-33774165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
196-433
               

               
Cow position:
               
chr14:12081019-12081264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
197-436
               

               
Cow position:
               
chr14:12954263-12954516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr14:7695384-7695188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
201-364
               

               
Cow position:
               
chr14:25002150-25001983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr14:4877118-4877299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr14:29965131-29964950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
201-385
               

               
Cow position:
               
chr14:1796304-1796119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
201-385
               

               
Cow position:
               
chr14:19594016-19594210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
201-386
               

               
Cow position:
               
chr14:8541101-8541286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
201-386
               

               
Cow position:
               
chr14:50362909-50362720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
201-387
               

               
Cow position:
               
chr14:33751650-33751463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr14:4991119-4990923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr14:38143995-38144188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
201-402
               

               
Cow position:
               
chr14:14316996-14316797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr14:8786438-8786678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr14:16352459-16352217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr14:21691159-21691398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
202-381
               

               
Cow position:
               
chr14:25779210-25779033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
202-385
               

               
Cow position:
               
chr14:12035520-12035337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
202-389
               

               
Cow position:
               
chr14:36442904-36443095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr14:25381534-25381299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr14:40209013-40208767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
204-385
               

               
Cow position:
               
chr14:36254596-36254769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
206-385
               

               
Cow position:
               
chr14:48744622-48744442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
207-382
               

               
Cow position:
               
chr14:12520197-12520372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
208-378
               

               
Cow position:
               
chr14:803794-803620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
209-384
               

               
Cow position:
               
chr14:25824795-25824624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr14:25399179-25398960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr14:21357665-21357466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
211-382
               

               
Cow position:
               
chr14:49488065-49487891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr14:27998937-27999108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
211-436
               

               
Cow position:
               
chr14:41837768-41838000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr14:3943452-3943637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
229-382
               

               
Cow position:
               
chr14:34448891-34449041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
230-382
               

               
Cow position:
               
chr14:34399716-34399868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
230-432
               

               
Cow position:
               
chr14:44084413-44084613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
150, 7
               

               
Conread position:
               
231-436
               

               
Cow position:
               
chr14:4271298-4271502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
231-436
               

               
Cow position:
               
chr14:6441987-6441785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
232-360
               

               
Cow position:
               
chr14:20050948-20051075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
232-382
               

               
Cow position:
               
chr14:5958909-5959057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
234-382
               

               
Cow position:
               
chr14:28924243-28924098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
234-382
               

               
Cow position:
               
chr14:37902070-37901925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
234-386
               

               
Cow position:
               
chr14:10609757-10609606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
235-386
               

               
Cow position:
               
chr14:23078716-23078866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
235-393
               

               
Cow position:
               
chr14:20481766-20481921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
237-388
               

               
Cow position:
               
chr14:27077051-27076901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
237-412
               

               
Cow position:
               
chr14:13398413-13398250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
238-429
               

               
Cow position:
               
chr14:21084413-21084225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
239-374
               

               
Cow position:
               
chr14:33644029-33643898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr14:28605304-28605134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr14:16749616-16749757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
242-398
               

               
Cow position:
               
chr14:9837824-9837978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
247-432
               

               
Cow position:
               
chr14:47519689-47519870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
252-385
               

               
Cow position:
               
chr14:18350798-18350931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
258-436
               

               
Cow position:
               
chr14:48213133-48212961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
259-436
               

               
Cow position:
               
chr14:41531613-41531785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
261-433
               

               
Cow position:
               
chr14:16207448-16207627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
265-382
               

               
Cow position:
               
chr14:37436665-37436780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
266-417
               

               
Cow position:
               
chr14:5400629-5400481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
271-400
               

               
Cow position:
               
chr14:24785698-24785570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
279-434
               

               
Cow position:
               
chr14:3173705-3173865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
280-388
               

               
Cow position:
               
chr14:41191064-41191171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
280-431
               

               
Cow position:
               
chr14:48399539-48399387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
280-436
               

               
Cow position:
               
chr14:26805020-26805174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
288-436
               

               
Cow position:
               
chr14:41267709-41267864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
292-436
               

               
Cow position:
               
chr14:24799689-24799830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               
Show alignments to all cow chromosomes.