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Cow genome map

           
Conread name:
           
reje34b_d9.y1
        

               
Conread position:
               
168-432
               

               
Cow position:
               
chr29:44236345-44236620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
168-436
               

               
Cow position:
               
chr29:21265654-21265923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
170-306
               

               
Cow position:
               
chr29:19250244-19250381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
171-306
               

               
Cow position:
               
chr29:12004867-12004727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
171-385
               

               
Cow position:
               
chr29:21443447-21443224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr29:43495944-43496160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
171-436
               

               
Cow position:
               
chr29:12761848-12762118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
172-405
               

               
Cow position:
               
chr29:29512246-29512007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr29:9512162-9512405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
172-426
               

               
Cow position:
               
chr29:7663372-7663117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr29:28993756-28994038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
175-436
               

               
Cow position:
               
chr29:6772033-6772292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
176-430
               

               
Cow position:
               
chr29:7407983-7407748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr29:35458867-35458640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
179-406
               

               
Cow position:
               
chr29:17297045-17297271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
190, 63
               

               
Conread position:
               
180-436
               

               
Cow position:
               
chr29:3685607-3685339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
182-432
               

               
Cow position:
               
chr29:15940727-15940479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr29:4444621-4444881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr29:40096872-40097072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
183-436
               

               
Cow position:
               
chr29:11434031-11434294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
184-369
               

               
Cow position:
               
chr29:28868546-28868740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr29:13372575-13372773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr29:17222323-17222524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
184-393
               

               
Cow position:
               
chr29:707042-706836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
184-393
               

               
Cow position:
               
chr29:40994982-40994770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
184-424
               

               
Cow position:
               
chr29:11053949-11053705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr29:5947884-5947651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr29:22721283-22721535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
185-329
               

               
Cow position:
               
chr29:17301438-17301591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
185-332
               

               
Cow position:
               
chr29:36183190-36183341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr29:868684-868864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
185-362
               

               
Cow position:
               
chr29:41365021-41365199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
185-367
               

               
Cow position:
               
chr29:23697888-23698073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 171
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr29:2984797-2984987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr29:23984049-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
185-373
               

               
Cow position:
               
chr29:24952597-24952786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
185-374
               

               
Cow position:
               
chr29:19821196-19821385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
185-374
               

               
Cow position:
               
chr29:32290517-32290711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr29:26654127-26653941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr29:40852842-40853032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
185-377
               

               
Cow position:
               
chr29:28775548-28775358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
185-378
               

               
Cow position:
               
chr29:27873513-27873707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:2055967-2056171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:5046561-5046763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:6015031-6015236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:6286249-6286051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:13639461-13639256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:17409244-17409445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:22778268-22778063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:25088661-25088853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:25333553-25333351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:28166304-28166112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:34745752-34745549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr29:39567596-39567791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
185-383
               

               
Cow position:
               
chr29:29769442-29769240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
185-384
               

               
Cow position:
               
chr29:35084313-35084111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr29:4334637-4334832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr29:9709606-9709810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr29:41530756-41530963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-388
               

               
Cow position:
               
chr29:11398015-11397812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
185-390
               

               
Cow position:
               
chr29:4520244-4520452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 124
               

               
Conread position:
               
185-390
               

               
Cow position:
               
chr29:19428568-19428778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
185-390
               

               
Cow position:
               
chr29:22936179-22936389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
185-391
               

               
Cow position:
               
chr29:11705032-11705231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr29:12025561-12025355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr29:16657599-16657814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr29:23874368-23874581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr29:29057092-29057295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr29:87107-86886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr29:38580886-38581105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr29:5409231-5409010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-407
               

               
Cow position:
               
chr29:2263088-2262861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
185-408
               

               
Cow position:
               
chr29:13373210-13373436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 214
               

               
Conread position:
               
185-410
               

               
Cow position:
               
chr29:35291999-35292230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 202
               

               
Conread position:
               
185-416
               

               
Cow position:
               
chr29:31928890-31929129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
185-420
               

               
Cow position:
               
chr29:28979572-28979347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
202, 19
               

               
Conread position:
               
185-423
               

               
Cow position:
               
chr29:32799799-32799561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
185-427
               

               
Cow position:
               
chr29:13028346-13028598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
185-432
               

               
Cow position:
               
chr29:18021771-18021524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
185-432
               

               
Cow position:
               
chr29:28195604-28195355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr29:9912081-9912332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr29:10153879-10153633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr29:17154676-17154941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:1395505-1395754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:6337570-6337833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:6925921-6926163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:8862569-8862317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:12626070-12625816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr29:16309651-16309903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr29:12680068-12680253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
186-372
               

               
Cow position:
               
chr29:10235223-10235034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
186-378
               

               
Cow position:
               
chr29:1229518-1229713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
186-382
               

               
Cow position:
               
chr29:22175597-22175791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
186-388
               

               
Cow position:
               
chr29:8926553-8926345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr29:847731-847521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr29:39329684-39329482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr29:24624160-24624379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
186-408
               

               
Cow position:
               
chr29:6844718-6844495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
186-416
               

               
Cow position:
               
chr29:34359070-34358834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
186-421
               

               
Cow position:
               
chr29:13127213-13126972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
186-422
               

               
Cow position:
               
chr29:26615812-26615570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr29:35501742-35501483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 126
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr29:40299101-40298910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
187-432
               

               
Cow position:
               
chr29:13634390-13634142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
187-434
               

               
Cow position:
               
chr29:10653254-10653502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
201, 68
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr29:11677547-11677299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr29:37961066-37960815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
188-338
               

               
Cow position:
               
chr29:13486863-13487017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
188-382
               

               
Cow position:
               
chr29:31891615-31891422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
188-384
               

               
Cow position:
               
chr29:31489235-31489430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
188-406
               

               
Cow position:
               
chr29:31813862-31814070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 54
               

               
Conread position:
               
188-433
               

               
Cow position:
               
chr29:44008867-44008628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
190-364
               

               
Cow position:
               
chr29:24604223-24604045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
190-376
               

               
Cow position:
               
chr29:23813122-23812935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr29:694087-693899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr29:19949215-19949417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr29:40583707-40583895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr29:12784042-12783852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr29:36217031-36217227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
190-390
               

               
Cow position:
               
chr29:26416265-26416469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
190-400
               

               
Cow position:
               
chr29:25737504-25737287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
190-433
               

               
Cow position:
               
chr29:4367636-4367883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
191-407
               

               
Cow position:
               
chr29:20770258-20770480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr29:16195760-16195950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr29:463740-463533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
194-365
               

               
Cow position:
               
chr29:26319095-26319259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr29:5186578-5186379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr29:11647007-11647215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
194-431
               

               
Cow position:
               
chr29:356237-356479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
195-436
               

               
Cow position:
               
chr29:4085238-4085478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
196-382
               

               
Cow position:
               
chr29:8005003-8004817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
198-374
               

               
Cow position:
               
chr29:23220578-23220399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
198-382
               

               
Cow position:
               
chr29:7103479-7103668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
198-388
               

               
Cow position:
               
chr29:43183386-43183197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
198-418
               

               
Cow position:
               
chr29:11005655-11005879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
199-436
               

               
Cow position:
               
chr29:5616945-5616705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
200-385
               

               
Cow position:
               
chr29:5210412-5210605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
200-407
               

               
Cow position:
               
chr29:29324488-29324292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
201-378
               

               
Cow position:
               
chr29:42886477-42886649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:749983-749797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:1022222-1022405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:6293547-6293370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:13867285-13867100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:21645251-21645419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr29:22519203-22519017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr29:1325367-1325561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
201-433
               

               
Cow position:
               
chr29:21186947-21186714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr29:6207991-6208223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr29:40337602-40337379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
202-434
               

               
Cow position:
               
chr29:23825596-23825842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
204-365
               

               
Cow position:
               
chr29:40633576-40633735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
204-385
               

               
Cow position:
               
chr29:18450205-18450026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
205-374
               

               
Cow position:
               
chr29:109628-109790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
208-360
               

               
Cow position:
               
chr29:36830293-36830446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
208-431
               

               
Cow position:
               
chr29:30351001-30350773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
210-433
               

               
Cow position:
               
chr29:4691457-4691229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 107
               

               
Conread position:
               
211-365
               

               
Cow position:
               
chr29:26263772-26263929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
212-376
               

               
Cow position:
               
chr29:501137-501301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
215-382
               

               
Cow position:
               
chr29:43544661-43544493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
224-436
               

               
Cow position:
               
chr29:22895680-22895890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
227-415
               

               
Cow position:
               
chr29:11042384-11042569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
232-375
               

               
Cow position:
               
chr29:30918510-30918652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
232-436
               

               
Cow position:
               
chr29:31651367-31651584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-393
               

               
Cow position:
               
chr29:5520520-5520364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
237-422
               

               
Cow position:
               
chr29:27819185-27819373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 71
               

               
Conread position:
               
237-433
               

               
Cow position:
               
chr29:31981797-31982001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 71
               

               
Conread position:
               
239-386
               

               
Cow position:
               
chr29:9310569-9310714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
239-436
               

               
Cow position:
               
chr29:4423471-4423268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
239-436
               

               
Cow position:
               
chr29:5788996-5789197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
242-368
               

               
Cow position:
               
chr29:19559048-19558923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
242-382
               

               
Cow position:
               
chr29:31934350-31934489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
243-393
               

               
Cow position:
               
chr29:16365916-16365764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
260-430
               

               
Cow position:
               
chr29:39023350-39023181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
262-393
               

               
Cow position:
               
chr29:16672482-16672612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
264-378
               

               
Cow position:
               
chr29:19244466-19244353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
264-382
               

               
Cow position:
               
chr29:24539084-24539201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
264-436
               

               
Cow position:
               
chr29:10318591-10318768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
265-414
               

               
Cow position:
               
chr29:27688744-27688596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
268-436
               

               
Cow position:
               
chr29:37293038-37293209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
271-382
               

               
Cow position:
               
chr29:629538-629648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
272-432
               

               
Cow position:
               
chr29:11366240-11366393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
274-376
               

               
Cow position:
               
chr29:24746872-24746973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
274-436
               

               
Cow position:
               
chr29:21012339-21012183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
283-424
               

               
Cow position:
               
chr29:33393690-33393831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
283-433
               

               
Cow position:
               
chr29:26207987-26208138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
299-436
               

               
Cow position:
               
chr29:8794379-8794515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 10
               
Show alignments to all cow chromosomes.