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Cow genome map

           
Conread name:
           
reje34b_d9.y1
        

               
Conread position:
               
168-382
               

               
Cow position:
               
chr4:48104675-48104464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
171-333
               

               
Cow position:
               
chr4:47041537-47041373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
171-393
               

               
Cow position:
               
chr4:21874700-21874918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
171-393
               

               
Cow position:
               
chr4:59377798-59378025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
171-436
               

               
Cow position:
               
chr4:23646958-23646695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
172-318
               

               
Cow position:
               
chr4:59105928-59105784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
172-369
               

               
Cow position:
               
chr4:9140-8941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
172-416
               

               
Cow position:
               
chr4:44451418-44451657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr4:58858274-58858033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr4:3837161-3837443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr4:17378946-17378689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr4:20066328-20066065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr4:58881071-58880869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 143
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr4:19316110-19315910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr4:46477060-46476841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
174-434
               

               
Cow position:
               
chr4:19292613-19292886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
174-436
               

               
Cow position:
               
chr4:21064928-21065200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
174-436
               

               
Cow position:
               
chr4:35870093-35870360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
175-369
               

               
Cow position:
               
chr4:33395808-33395606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr4:30974232-30974426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
175-382
               

               
Cow position:
               
chr4:51605721-51605509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr4:43740434-43740642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
176-433
               

               
Cow position:
               
chr4:50769870-50769613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
176-436
               

               
Cow position:
               
chr4:52225904-52226160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
177-382
               

               
Cow position:
               
chr4:12127735-12127534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr4:38999324-38999550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr4:62471977-62472195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
179-436
               

               
Cow position:
               
chr4:8801406-8801664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
180-436
               

               
Cow position:
               
chr4:31348290-31348025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
182-386
               

               
Cow position:
               
chr4:5964087-5963881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr4:5913447-5913189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
183-369
               

               
Cow position:
               
chr4:54455441-54455251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
183-374
               

               
Cow position:
               
chr4:53346228-53346428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
183-382
               

               
Cow position:
               
chr4:43865955-43865752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
183-386
               

               
Cow position:
               
chr4:54479002-54478812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
201, 18
               

               
Conread position:
               
183-393
               

               
Cow position:
               
chr4:11380186-11380395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
183-393
               

               
Cow position:
               
chr4:45738578-45738359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
183-410
               

               
Cow position:
               
chr4:27344775-27344545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
183-436
               

               
Cow position:
               
chr4:61066674-61066928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
184-311
               

               
Cow position:
               
chr4:2537096-2537226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
184-377
               

               
Cow position:
               
chr4:54171531-54171726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr4:2774621-2774824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr4:23526599-23526798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr4:30791876-30792073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
184-382
               

               
Cow position:
               
chr4:59785222-59785427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
184-385
               

               
Cow position:
               
chr4:9925722-9925521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
184-386
               

               
Cow position:
               
chr4:45563646-45563855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
184-388
               

               
Cow position:
               
chr4:13941366-13941567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
184-390
               

               
Cow position:
               
chr4:4085217-4084998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
184-418
               

               
Cow position:
               
chr4:23166807-23167041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr4:9198868-9199121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr4:48409366-48409110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
184-436
               

               
Cow position:
               
chr4:61897632-61897377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
185-307
               

               
Cow position:
               
chr4:11671357-11671483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
185-317
               

               
Cow position:
               
chr4:37619984-37619848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
185-319
               

               
Cow position:
               
chr4:21517102-21516961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-327
               

               
Cow position:
               
chr4:58261251-58261100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
185-331
               

               
Cow position:
               
chr4:25359513-25359652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
185-333
               

               
Cow position:
               
chr4:21371294-21371447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
185-346
               

               
Cow position:
               
chr4:44973540-44973703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
185-362
               

               
Cow position:
               
chr4:27632353-27632529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
185-362
               

               
Cow position:
               
chr4:65432051-65432235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-369
               

               
Cow position:
               
chr4:38952455-38952645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
185-370
               

               
Cow position:
               
chr4:59871388-59871568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
185-374
               

               
Cow position:
               
chr4:8413215-8413026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
185-374
               

               
Cow position:
               
chr4:62772022-62771822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr4:38935259-38935456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr4:45073967-45074157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
185-375
               

               
Cow position:
               
chr4:45711272-45711461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr4:16239246-16239069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:3850455-3850656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:12004128-12004319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:12901651-12901453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:13222280-13222082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:16814295-16814487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:19322179-19321973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:19408097-19407893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:22546935-22546737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:23445146-23444942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:27276642-27276439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:29805465-29805269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:36577727-36577522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:36893260-36893464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:45583216-45583018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:45589696-45589496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:45596127-45595927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:46136654-46136854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:46494199-46494408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
185-382
               

               
Cow position:
               
chr4:56239952-56239755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
185-384
               

               
Cow position:
               
chr4:10056116-10056312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
185-384
               

               
Cow position:
               
chr4:37313072-37313271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr4:22713587-22713388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr4:45367639-45367847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr4:48173042-48173245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:12591308-12591105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:28399517-28399305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:45249878-45250080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:45662606-45662403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:51769014-51769211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
185-386
               

               
Cow position:
               
chr4:52779755-52779961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr4:68764424-68764627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
185-392
               

               
Cow position:
               
chr4:12676708-12676913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
185-392
               

               
Cow position:
               
chr4:46060849-46061056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:4321097-4320875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:22101357-22101149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:25879301-25879506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:27755397-27755187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:32259942-32259725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:34383440-34383226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:41186006-41185802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:44782276-44782490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:46591568-46591784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:47348730-47348942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr4:54190991-54191205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:2099540-2099759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:23600082-23600294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:28836438-28836663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:32726129-32726352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:37502724-37502936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:38946111-38946344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 133
               

               
Conread position:
               
185-405
               

               
Cow position:
               
chr4:46456157-46455940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
185-410
               

               
Cow position:
               
chr4:13974066-13973836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
185-410
               

               
Cow position:
               
chr4:16513617-16513390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
185-410
               

               
Cow position:
               
chr4:41371038-41370804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
185-411
               

               
Cow position:
               
chr4:44184208-44183981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr4:37675518-37675748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr4:45775437-45775200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
185-417
               

               
Cow position:
               
chr4:27997586-27997826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
185-418
               

               
Cow position:
               
chr4:47510293-47510524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
185-422
               

               
Cow position:
               
chr4:16881460-16881209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
185-422
               

               
Cow position:
               
chr4:41301087-41300851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
185-422
               

               
Cow position:
               
chr4:46597281-46597517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
185-425
               

               
Cow position:
               
chr4:20279239-20279473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
185-432
               

               
Cow position:
               
chr4:22725007-22725240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
185-432
               

               
Cow position:
               
chr4:56570710-56570962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr4:243131-243385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr4:20327808-20327550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
185-434
               

               
Cow position:
               
chr4:16762826-16762573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
185-435
               

               
Cow position:
               
chr4:10732126-10732394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
185-435
               

               
Cow position:
               
chr4:31004504-31004238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
185-435
               

               
Cow position:
               
chr4:36929220-36929470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:961759-961490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 143
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:3440308-3440568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:4084545-4084282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:9681205-9681466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:11610779-11611039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:13026205-13026469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:21365309-21365559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:22860810-22860552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:25370021-25370269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:29291422-29291681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:29384319-29384066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:29709861-29709603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:33091283-33091526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:39616891-39617118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:41602752-41602998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:45234962-45234715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:49794575-49794825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:60030809-60031060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
185-436
               

               
Cow position:
               
chr4:60897373-60897118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
186-333
               

               
Cow position:
               
chr4:13255992-13256138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr4:34630797-34630990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
186-375
               

               
Cow position:
               
chr4:21391909-21391714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
186-376
               

               
Cow position:
               
chr4:55395664-55395860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
186-382
               

               
Cow position:
               
chr4:20822-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
186-382
               

               
Cow position:
               
chr4:45636068-45636271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr4:38944354-38944149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr4:51727980-51728187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr4:23847144-23846936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr4:69543086-69543298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
186-400
               

               
Cow position:
               
chr4:17084437-17084216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
186-420
               

               
Cow position:
               
chr4:19313914-19314151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 131
               

               
Conread position:
               
186-425
               

               
Cow position:
               
chr4:37935380-37935135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
186-429
               

               
Cow position:
               
chr4:25888926-25888675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr4:5580460-5580715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr4:12560933-12561194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr4:38157187-38156918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr4:40823210-40822955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
186-436
               

               
Cow position:
               
chr4:44449600-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
187-357
               

               
Cow position:
               
chr4:51729857-51730030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
187-369
               

               
Cow position:
               
chr4:8770013-8770190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
187-377
               

               
Cow position:
               
chr4:53126023-53126211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
187-381
               

               
Cow position:
               
chr4:6653634-6653825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:10968482-10968284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:16593987-16594187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:20147090-20147288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:23509498-23509698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:32693689-32693893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:45077171-45076972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
187-388
               

               
Cow position:
               
chr4:65950560-65950765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
187-393
               

               
Cow position:
               
chr4:2602137-2602346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
187-393
               

               
Cow position:
               
chr4:65265406-65265190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
187-415
               

               
Cow position:
               
chr4:66547864-66547630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr4:55508338-55508086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
188-382
               

               
Cow position:
               
chr4:51784086-51784284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr4:44773139-44772938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr4:19102977-19102777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr4:60719009-60719206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr4:59277568-59277364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
190-433
               

               
Cow position:
               
chr4:65815797-65815551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
191-382
               

               
Cow position:
               
chr4:44838986-44838790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
191-384
               

               
Cow position:
               
chr4:13344449-13344645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
191-393
               

               
Cow position:
               
chr4:36731103-36731306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr4:54927532-54927335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr4:61313300-61313108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
193-382
               

               
Cow position:
               
chr4:49629392-49629585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
193-436
               

               
Cow position:
               
chr4:63472163-63471915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
194-350
               

               
Cow position:
               
chr4:23854102-23854253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
194-382
               

               
Cow position:
               
chr4:7704415-7704220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
194-382
               

               
Cow position:
               
chr4:17186439-17186246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr4:40414718-40414519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr4:45685377-45685565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr4:19323885-19324083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
194-388
               

               
Cow position:
               
chr4:47280045-47280238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr4:47730767-47730980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
194-417
               

               
Cow position:
               
chr4:65175230-65175006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr4:65919526-65919709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
195-381
               

               
Cow position:
               
chr4:65650212-65650030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
195-405
               

               
Cow position:
               
chr4:61188957-61188741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
197-393
               

               
Cow position:
               
chr4:59002217-59002024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
200-393
               

               
Cow position:
               
chr4:66380423-66380224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr4:8182720-8182515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
201-333
               

               
Cow position:
               
chr4:39231602-39231465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
201-356
               

               
Cow position:
               
chr4:5577288-5577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr4:1495483-1495304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr4:20027185-20026999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
201-383
               

               
Cow position:
               
chr4:5460945-5460756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
201-385
               

               
Cow position:
               
chr4:10999786-10999607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
201-386
               

               
Cow position:
               
chr4:19501168-19500983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr4:1791-1987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr4:19098386-19098588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr4:44612925-44613117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr4:45626702-45626512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
201-404
               

               
Cow position:
               
chr4:26400883-26401082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
201-412
               

               
Cow position:
               
chr4:19708851-19709073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
201-416
               

               
Cow position:
               
chr4:508987-508772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
201-418
               

               
Cow position:
               
chr4:6208379-6208599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
201-426
               

               
Cow position:
               
chr4:63262268-63262063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr4:44496291-44496537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
201-436
               

               
Cow position:
               
chr4:52087846-52088083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
202-382
               

               
Cow position:
               
chr4:18756355-18756539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
202-386
               

               
Cow position:
               
chr4:45705967-45706148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
202-435
               

               
Cow position:
               
chr4:13142632-13142405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr4:34369530-34369289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
203-377
               

               
Cow position:
               
chr4:48902700-48902525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
203-389
               

               
Cow position:
               
chr4:19430283-19430477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
203-432
               

               
Cow position:
               
chr4:58834483-58834246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
204-382
               

               
Cow position:
               
chr4:54921164-54920985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
204-385
               

               
Cow position:
               
chr4:20142984-20142803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
206-355
               

               
Cow position:
               
chr4:21173774-21173923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
207-377
               

               
Cow position:
               
chr4:64040047-64040215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
208-382
               

               
Cow position:
               
chr4:4277742-4277570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr4:24371930-24371751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr4:21063857-21063636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr4:45871929-45871709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr4:26012326-26012516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr4:26830632-26830822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
211-382
               

               
Cow position:
               
chr4:19542075-19542237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
213-382
               

               
Cow position:
               
chr4:54541708-54541533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr4:35638963-35638778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
229-436
               

               
Cow position:
               
chr4:38700204-38700000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
230-385
               

               
Cow position:
               
chr4:51920500-51920653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
233-385
               

               
Cow position:
               
chr4:38350244-38350092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
236-386
               

               
Cow position:
               
chr4:27698989-27699140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
237-367
               

               
Cow position:
               
chr4:59008393-59008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
237-436
               

               
Cow position:
               
chr4:31758230-31758427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
238-400
               

               
Cow position:
               
chr4:12135965-12135802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr4:32561795-32561936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
242-430
               

               
Cow position:
               
chr4:5797932-5798115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
242-436
               

               
Cow position:
               
chr4:42232057-42231858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
244-382
               

               
Cow position:
               
chr4:10958705-10958846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
244-428
               

               
Cow position:
               
chr4:40679018-40679195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
248-436
               

               
Cow position:
               
chr4:22482293-22482495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
249-412
               

               
Cow position:
               
chr4:17304420-17304260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
250-382
               

               
Cow position:
               
chr4:19539263-19539132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
250-386
               

               
Cow position:
               
chr4:46702684-46702549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
250-386
               

               
Cow position:
               
chr4:50676196-50676063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 54
               

               
Conread position:
               
250-393
               

               
Cow position:
               
chr4:60363324-60363464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
251-393
               

               
Cow position:
               
chr4:15462278-15462135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
252-412
               

               
Cow position:
               
chr4:32272997-32272840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
262-399
               

               
Cow position:
               
chr4:19496480-19496616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
265-436
               

               
Cow position:
               
chr4:8083810-8083633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
268-385
               

               
Cow position:
               
chr4:61268183-61268299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
269-436
               

               
Cow position:
               
chr4:834857-834695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
270-375
               

               
Cow position:
               
chr4:56233964-56234066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
276-381
               

               
Cow position:
               
chr4:58389242-58389138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
279-425
               

               
Cow position:
               
chr4:18956655-18956514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
280-393
               

               
Cow position:
               
chr4:51708069-51708181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
280-405
               

               
Cow position:
               
chr4:42044971-42044849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
280-408
               

               
Cow position:
               
chr4:46761611-46761737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
281-436
               

               
Cow position:
               
chr4:54501018-54500869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
282-382
               

               
Cow position:
               
chr4:21533090-21532992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
286-436
               

               
Cow position:
               
chr4:21479221-21479075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
316-436
               

               
Cow position:
               
chr4:19558724-19558842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.