Cow genome map
| Conread name: | reje34b_p12.y1 |
| Conread position: | 1-190 |
| Cow position: | chr19:14948185-14947996 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-238 |
| Cow position: | chr19:23650172-23650407 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 1-251 |
| Cow position: | chr19:14959539-14959291 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-255 |
| Cow position: | chr19:23613798-23614050 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 1-260 |
| Cow position: | chr19:14940270-14940527 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 1-260 |
| Cow position: | chr19:23614638-23614895 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 1-260 |
| Cow position: | chr19:23649920-23650177 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 188, 195 |
| Conread position: | 1-261 |
| Cow position: | chr19:14940354-14940612 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-267 |
| Cow position: | chr19:20678233-20678497 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 1-268 |
| Cow position: | chr19:14959623-14959359 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 1-269 |
| Cow position: | chr19:14948353-14948088 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 105, 114 |
| Conread position: | 1-269 |
| Cow position: | chr19:20635351-20635086 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 1-269 |
| Cow position: | chr19:23649500-23649765 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 1-269 |
| Cow position: | chr19:23649752-23650017 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-282 |
| Cow position: | chr19:14940018-14940296 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-284 |
| Cow position: | chr19:20677897-20678177 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 1-284 |
| Cow position: | chr19:20678317-20678597 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 1-284 |
| Cow position: | chr19:23614050-23614330 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-287 |
| Cow position: | chr19:14940438-14940722 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 281, 193 |
| Conread position: | 1-294 |
| Cow position: | chr19:23614806-23615099 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 285, 209 |
| Conread position: | 1-296 |
| Cow position: | chr19:14960027-14959737 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 96, 86 |
| Conread position: | 1-296 |
| Cow position: | chr19:23597311-23597603 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 86 |
| Conread position: | 1-297 |
| Cow position: | chr19:20678149-20678441 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 201, 182 |
| Conread position: | 1-298 |
| Cow position: | chr19:20635687-20635396 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 1-304 |
| Cow position: | chr19:20677729-20678027 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 268, 200 |
| Conread position: | 1-319 |
| Cow position: | chr19:23650004-23650316 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-320 |
| Cow position: | chr19:20678065-20678378 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-320 |
| Cow position: | chr19:23613462-23613775 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 2-241 |
| Cow position: | chr19:23649837-23650074 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 2-246 |
| Cow position: | chr19:43570274-43570035 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-268 |
| Cow position: | chr19:14940186-14940450 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 2-271 |
| Cow position: | chr19:23597395-23597663 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 4-261 |
| Cow position: | chr19:14959368-14959122 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-269 |
| Cow position: | chr19:23597062-23597324 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 4-270 |
| Cow position: | chr19:20677564-20677827 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 4-320 |
| Cow position: | chr19:23597230-23597540 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 29-241 |
| Cow position: | chr19:14948492-14948283 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 36-269 |
| Cow position: | chr19:23649367-23649597 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 36-293 |
| Cow position: | chr19:23614337-23614594 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 37-315 |
| Cow position: | chr19:14940138-14940410 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 178, 0 |
Show alignments to all cow chromosomes.