Cow genome map
| Conread name: | reje34b_p12.y1 |
| Conread position: | 1-185 |
| Cow position: | chr7:11434460-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-238 |
| Cow position: | chr7:42878577-42878342 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-243 |
| Cow position: | chr7:8278127-8278367 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 1-243 |
| Cow position: | chr7:11600824-11600584 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 187, 182 |
| Conread position: | 1-244 |
| Cow position: | chr7:18390525-18390767 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 222, 213 |
| Conread position: | 1-246 |
| Cow position: | chr7:3179892-3180135 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-258 |
| Cow position: | chr7:8243749-8244004 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 1-260 |
| Cow position: | chr7:8325432-8325689 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 1-261 |
| Cow position: | chr7:3179724-3179982 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 31, 35 |
| Conread position: | 1-269 |
| Cow position: | chr7:11600992-11600727 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 125, 116 |
| Conread position: | 1-269 |
| Cow position: | chr7:18390357-18390622 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 1-269 |
| Cow position: | chr7:42878997-42878732 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 1-270 |
| Cow position: | chr7:8278211-8278475 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 1-270 |
| Cow position: | chr7:8324760-8325026 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 22 |
| Conread position: | 1-270 |
| Cow position: | chr7:8325348-8325614 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 1-284 |
| Cow position: | chr7:8325852-8326132 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 1-290 |
| Cow position: | chr7:8277539-8277826 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 105 |
| Conread position: | 1-296 |
| Cow position: | chr7:1014798-1015090 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-313 |
| Cow position: | chr7:3180648-3180946 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 187, 149 |
| Conread position: | 1-320 |
| Cow position: | chr7:1015050-1015363 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 282, 209 |
| Conread position: | 1-320 |
| Cow position: | chr7:3180312-3180625 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 1-320 |
| Cow position: | chr7:8243413-8243726 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 1-320 |
| Cow position: | chr7:8277707-8278020 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 1-320 |
| Cow position: | chr7:8325600-8325913 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 1-328 |
| Cow position: | chr7:11600740-11600414 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 92, 86 |
| Conread position: | 3-247 |
| Cow position: | chr7:1014386-1014628 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 185, 178 |
| Conread position: | 4-247 |
| Cow position: | chr7:11601157-11600916 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 4-270 |
| Cow position: | chr7:8325099-8325362 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 95 |
| Conread position: | 4-272 |
| Cow position: | chr7:8243333-8243598 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 48 |
| Conread position: | 4-321 |
| Cow position: | chr7:1014303-1014614 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 5-237 |
| Cow position: | chr7:42878741-42878511 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 7-188 |
| Cow position: | chr7:18390615-18390796 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-269 |
| Cow position: | chr7:1014917-1015147 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 37-260 |
| Cow position: | chr7:8324964-8325185 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 37-261 |
| Cow position: | chr7:1439533-1439758 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 161, 55 |
| Conread position: | 37-267 |
| Cow position: | chr7:18390225-18390452 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 37-270 |
| Cow position: | chr7:11434508-11434278 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 39-320 |
| Cow position: | chr7:1014668-1014943 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 42-267 |
| Cow position: | chr7:8325221-8325443 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 42-269 |
| Cow position: | chr7:1014257-1014481 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 43-270 |
| Cow position: | chr7:8278001-8278225 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 49-255 |
| Cow position: | chr7:8325732-8325936 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 49-265 |
| Cow position: | chr7:8278091-8278305 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 54-255 |
| Cow position: | chr7:8277256-8277455 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 44 |
Show alignments to all cow chromosomes.