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Cow genome map

           
Conread name:
           
relu1319b_o16.y1
        

               
Conread position:
               
1-112
               

               
Cow position:
               
chr19:35457600-35457486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr19:11565215-11565380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr19:23244583-23244751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr19:11758666-11758837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr19:5185307-5185489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr19:34620093-34620268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr19:22799141-22799327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr19:25696272-25696452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr19:35018308-35018492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:7668636-7668459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:10706224-10706036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:20661474-20661661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:35742098-35741912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:39057181-39056999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr19:55544677-55544499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr19:33823255-33823070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr19:13129810-13129632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr19:8375368-8375553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr19:17795834-17795644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 162
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr19:18786386-18786577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr19:27348333-27348513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:1968368-1968561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:10545769-10545965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:15068067-15068250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:29627442-29627631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:1153150-1152966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:5656178-5656368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:8839540-8839345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:16567090-16566901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:21335670-21335870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:23786130-23785930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:24144958-24144760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:30533872-30533684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:36059868-36059674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:39751416-39751223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:42240354-42240549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:47772985-47773169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:53086217-53086040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr19:56383076-56382889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:8033683-8033481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:10093231-10093036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:11376467-11376664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:14592991-14592792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:17479028-17479219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:21199074-21198868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:21378534-21378725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:25572384-25572187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:33033504-33033705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:36176685-36176487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:37646900-37647097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:38392739-38392538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:39576633-39576828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:42726298-42726095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:43418345-43418162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:47671687-47671493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:55236426-55236234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
2-108
               

               
Cow position:
               
chr19:24137198-24137088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-113
               

               
Cow position:
               
chr19:25526216-25526106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chr19:11424377-11424512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr19:36722251-36722091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr19:6531826-6531651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr19:25851548-25851729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:11191680-11191869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:14347949-14347766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:19431166-19430987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:19919525-19919707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:32451017-32450832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:35540233-35540059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:43441102-43440917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr19:48409447-48409269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr19:36125524-36125337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr19:31762965-31762776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr19:26976125-26976297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr19:25851892-25852084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr19:25864984-25865176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr19:33912690-33912885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr19:54294652-54294835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr19:56150132-56150319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr19:2138168-2138362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr19:28451343-28451148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:729808-729988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:4445686-4445878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:4537480-4537670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:5913020-5913208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:10081004-10080811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:14253574-14253376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 184
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:14992986-14993178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:15863106-15863296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:16694106-16694305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:23005424-23005623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:29070784-29070965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:31874049-31873859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:32457580-32457384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:32955824-32955626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:33307038-33306839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:33468961-33468766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:34425521-34425328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:38340043-38340232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:39361079-39360882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:39622866-39623043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:40051455-40051643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:42694928-42694730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:47118559-47118756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr19:53037216-53037411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:6516203-6516002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:10171939-10171741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:12698254-12698065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:25053736-25053933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:31595236-31595040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:33932212-33932400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:35622295-35622107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:41024159-41023970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr19:46918786-46918582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-97
               

               
Cow position:
               
chr19:25807367-25807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr19:33903487-33903643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr19:21363505-21363685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr19:2734386-2734206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr19:41584910-41584729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr19:47187120-47187298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr19:48722965-48722775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr19:9541958-9542149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr19:4503155-4502962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr19:20670960-20671159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr19:55357991-55357798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr19:3621366-3621169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr19:27612238-27612426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr19:29368333-29368153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr19:29625838-29625657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr19:31825078-31825261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr19:53623495-53623316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr19:2589443-2589259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr19:2577498-2577318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr19:7612555-7612368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr19:8332229-8332036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr19:34955759-34955956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr19:23304564-23304752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr19:15438035-15437862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr19:43035174-43034995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chr19:52381461-52381280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 138
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chr19:38596551-38596357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chr19:38637874-38638059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr19:47727642-47727826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr19:51185354-51185168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-175
               

               
Cow position:
               
chr19:20935681-20935510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 159
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr19:17273802-17273977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr19:1664264-1664452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr19:51334603-51334410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr19:6417522-6417341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chr19:24062217-24062039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr19:37502744-37502903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
13-178
               

               
Cow position:
               
chr19:7473624-7473449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
13-186
               

               
Cow position:
               
chr19:39245824-39245642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
13-186
               

               
Cow position:
               
chr19:39794883-39794699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
13-186
               

               
Cow position:
               
chr19:46454778-46454593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
14-112
               

               
Cow position:
               
chr19:25835434-25835534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-165
               

               
Cow position:
               
chr19:24956522-24956678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
14-166
               

               
Cow position:
               
chr19:35762330-35762496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-172
               

               
Cow position:
               
chr19:27104669-27104503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
14-174
               

               
Cow position:
               
chr19:30471421-30471582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chr19:8211913-8212083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chr19:43058459-43058288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chr19:48475066-48474898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chr19:6049744-6049913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr19:630854-630688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
163, 95
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr19:35380627-35380806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr19:55210544-55210715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chr19:4587798-4587978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chr19:15887402-15887581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chr19:22765543-22765358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
15-173
               

               
Cow position:
               
chr19:433206-433371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 144
               

               
Conread position:
               
15-177
               

               
Cow position:
               
chr19:53542969-53543128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
15-180
               

               
Cow position:
               
chr19:10232490-10232654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chr19:44125565-44125391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chr19:51267816-51267637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chr19:53371976-53372154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chr19:46180893-46181074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-179
               

               
Cow position:
               
chr19:33882240-33882408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr19:53791505-53791688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr19:31846622-31846801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
18-177
               

               
Cow position:
               
chr19:34911806-34911638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr19:19673332-19673162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr19:36845168-36844992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
18-185
               

               
Cow position:
               
chr19:42777801-42777642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chr19:10186419-10186242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chr19:30925403-30925575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chr19:43431405-43431579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chr19:44838994-44839157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chr19:24358311-24358482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
19-150
               

               
Cow position:
               
chr19:52136775-52136917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
19-174
               

               
Cow position:
               
chr19:7637321-7637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr19:25999547-25999375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
20-138
               

               
Cow position:
               
chr19:3246134-3246254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
20-164
               

               
Cow position:
               
chr19:42243047-42243193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
20-180
               

               
Cow position:
               
chr19:20310716-20310882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr19:52456841-52457017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-186
               

               
Cow position:
               
chr19:7492351-7492182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chr19:17664559-17664382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chr19:23222552-23222377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
22-180
               

               
Cow position:
               
chr19:8128236-8128064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
23-186
               

               
Cow position:
               
chr19:46159971-46159799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
23-187
               

               
Cow position:
               
chr19:44144001-44144167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
25-186
               

               
Cow position:
               
chr19:30232640-30232475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
26-176
               

               
Cow position:
               
chr19:24669458-24669615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr19:10213580-10213412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr19:16096640-16096811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
27-175
               

               
Cow position:
               
chr19:10286815-10286662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
28-186
               

               
Cow position:
               
chr19:25086441-25086284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
30-180
               

               
Cow position:
               
chr19:13390824-13390668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chr19:39697977-39697815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
32-178
               

               
Cow position:
               
chr19:42663917-42664065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
37-186
               

               
Cow position:
               
chr19:25726979-25727135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
44-180
               

               
Cow position:
               
chr19:37633458-37633604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
44-185
               

               
Cow position:
               
chr19:19490060-19490196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
44-187
               

               
Cow position:
               
chr19:6891893-6892036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
53-186
               

               
Cow position:
               
chr19:38756177-38756040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
54-187
               

               
Cow position:
               
chr19:33858634-33858495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
61-186
               

               
Cow position:
               
chr19:21115180-21115049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.