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Cow genome map

           
Conread name:
           
relu1319b_o16.y1
        

               
Conread position:
               
1-105
               

               
Cow position:
               
chrX:20584299-20584190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chrX:31252393-31252283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chrX:34792333-34792476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chrX:13785388-13785537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chrX:1505684-1505523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chrX:31312002-31311835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chrX:24424413-24424595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:13382305-13382117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:18694949-18695128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:40035468-40035654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:45846074-45845887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chrX:47248811-47248994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chrX:4942781-4942959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chrX:7695725-7695550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:8869429-8869623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chrX:9201525-9201335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:7571878-7571693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:33855258-33855446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chrX:34411817-34411624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chrX:21642503-21642697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:619029-619228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:4996571-4996391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:12249777-12249585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:17725949-17725758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:20710050-20709851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:26875908-26876101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:27771986-27772176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:31436451-31436260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:35224271-35224082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:38006789-38006988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:42247211-42247404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:42381127-42381320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chrX:43527485-43527283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:678597-678789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:4750329-4750519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:11938958-11939145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:13177493-13177686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:14883983-14884183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:20582995-20582809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:22074769-22074579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:37232388-37232188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:40557706-40557897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:42469971-42470158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chrX:45414325-45414521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-107
               

               
Cow position:
               
chrX:616288-616397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-109
               

               
Cow position:
               
chrX:27228102-27227986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-112
               

               
Cow position:
               
chrX:29680286-29680400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-113
               

               
Cow position:
               
chrX:19273748-19273863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chrX:37955805-37955672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chrX:32821004-32820847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chrX:37781137-37781315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chrX:1499639-1499468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chrX:7277887-7277717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chrX:34565255-34565088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chrX:5017440-5017616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chrX:6234478-6234657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chrX:36778385-36778199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chrX:38549421-38549240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chrX:41884440-41884626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chrX:6278526-6278715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chrX:20752229-20752050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chrX:34401972-34401788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chrX:3579919-3579735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chrX:4632877-4633062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chrX:29121020-29120846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chrX:8925675-8925493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:5872293-5872099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:7351275-7351085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:14599507-14599315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:15147213-15147400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:34441477-34441664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:34502896-34502706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 182
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:35284594-35284408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:41166990-41167178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chrX:46315403-46315593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 182
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chrX:34554700-34554509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chrX:45110630-45110438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chrX:7336803-7336618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:1503310-1503119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:1514436-1514621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:5638194-5638389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:7646227-7646038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:7721963-7721764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:9416719-9416913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:9635211-9635401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:9997361-9997553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:11717814-11718000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:12018266-12018055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:13647812-13648004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:17662619-17662817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:17888445-17888626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:19019132-19019332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:19188912-19188716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:21593262-21593063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:22813041-22812842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 185
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:23514041-23514238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:25411815-25411620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:26440804-26441000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:27394048-27394234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:27516503-27516312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:27680369-27680183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:28845805-28845626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:31294589-31294762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:32020145-32020342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:35681315-35681125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:36283326-36283125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:37489697-37489510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:37836563-37836366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:38218682-38218495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:38439452-38439253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:40647960-40647758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:41743886-41743693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chrX:46072846-46073042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:8797227-8797027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:10412012-10412207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:11073219-11073412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:11656066-11655865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:16789878-16790058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:25815934-25816117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:33466584-33466393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:42994587-42994393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chrX:44396992-44396794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chrX:10831520-10831704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chrX:35273328-35273144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chrX:7718827-7718646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chrX:46429887-46430066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chrX:38094548-38094739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chrX:34532492-34532310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chrX:1616071-1616268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chrX:19930624-19930436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chrX:27509050-27509240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chrX:38967621-38967430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:5118530-5118706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:7509115-7508918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:9252210-9252399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:13191575-13191765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:33493750-33493554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:34192644-34192456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chrX:38840862-38840667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
4-150
               

               
Cow position:
               
chrX:36067985-36067836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chrX:45015551-45015378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chrX:39126304-39126121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 165
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chrX:42492545-42492731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chrX:10437696-10437885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chrX:28111480-28111286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chrX:45113591-45113408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chrX:30832880-30833045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chrX:41123037-41122852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chrX:23497699-23497884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chrX:31260656-31260851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chrX:11806046-11806238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chrX:34991003-34990820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chrX:37843690-37843506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chrX:41238403-41238577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chrX:25238142-25237957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chrX:41674079-41673883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chrX:42461775-42461966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chrX:47191438-47191619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chrX:17630837-17631023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
8-175
               

               
Cow position:
               
chrX:13265657-13265828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chrX:878411-878591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chrX:23091839-23091661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chrX:35413588-35413412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chrX:28098084-28097904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
9-170
               

               
Cow position:
               
chrX:17908322-17908487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
9-172
               

               
Cow position:
               
chrX:39938558-39938728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
9-175
               

               
Cow position:
               
chrX:15007183-15007359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chrX:877061-877236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chrX:37910411-37910239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chrX:16541705-16541890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 177
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chrX:2206585-2206764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chrX:38936662-38936481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chrX:7513479-7513295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
10-176
               

               
Cow position:
               
chrX:34543751-34543578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
13-175
               

               
Cow position:
               
chrX:42086827-42086653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chrX:17794945-17794764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
14-139
               

               
Cow position:
               
chrX:27145583-27145452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-149
               

               
Cow position:
               
chrX:45759352-45759215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
14-174
               

               
Cow position:
               
chrX:44731558-44731387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chrX:29601870-29602039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chrX:35387942-35388114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-177
               

               
Cow position:
               
chrX:12290691-12290525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chrX:21665632-21665807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:4123798-4123615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:11589627-11589812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:31948977-31949151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:32128026-32128200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:35542855-35542671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:42171336-42171519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chrX:43049309-43049122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chrX:39558390-39558569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chrX:40269448-40269255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chrX:42874944-42874757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
15-172
               

               
Cow position:
               
chrX:41878973-41879140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
15-173
               

               
Cow position:
               
chrX:16996461-16996300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
15-176
               

               
Cow position:
               
chrX:27174955-27174785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-179
               

               
Cow position:
               
chrX:48684266-48684436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-180
               

               
Cow position:
               
chrX:29509482-29509658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:2467845-2467659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:11856387-11856209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:14924960-14924780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:15485665-15485848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:17498044-17497876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:23563831-23564017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:30962914-30963092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-186
               

               
Cow position:
               
chrX:38642221-38642040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chrX:19015397-19015221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chrX:20339930-20340112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chrX:22482727-22482910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chrX:33020443-33020265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chrX:35609948-35609765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-169
               

               
Cow position:
               
chrX:1176021-1176185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chrX:4043894-4044064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chrX:9425782-9425956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chrX:14900765-14900941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chrX:23970342-23970168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
18-174
               

               
Cow position:
               
chrX:32420176-32420011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
18-175
               

               
Cow position:
               
chrX:7497196-7497035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
18-175
               

               
Cow position:
               
chrX:16324008-16324172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-180
               

               
Cow position:
               
chrX:1055438-1055602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
18-180
               

               
Cow position:
               
chrX:21672512-21672337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-180
               

               
Cow position:
               
chrX:28846925-28847093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
18-183
               

               
Cow position:
               
chrX:34662891-34663060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chrX:12309429-12309609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chrX:20151806-20151630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chrX:40116377-40116205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
18-186
               

               
Cow position:
               
chrX:40452253-40452433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chrX:2648397-2648571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chrX:15815041-15814876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chrX:35409614-35409447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
19-178
               

               
Cow position:
               
chrX:15139590-15139755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chrX:42499073-42499249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
20-172
               

               
Cow position:
               
chrX:36975906-36975744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-174
               

               
Cow position:
               
chrX:26285935-26285772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
20-175
               

               
Cow position:
               
chrX:29542265-29542427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
20-175
               

               
Cow position:
               
chrX:38853152-38852988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-186
               

               
Cow position:
               
chrX:42338988-42339156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chrX:9855259-9855079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chrX:9954100-9953920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chrX:45430062-45430238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
21-185
               

               
Cow position:
               
chrX:12979874-12980050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
21-186
               

               
Cow position:
               
chrX:6488530-6488366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
22-178
               

               
Cow position:
               
chrX:6640082-6639914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
22-186
               

               
Cow position:
               
chrX:23061398-23061234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chrX:24105579-24105407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
24-174
               

               
Cow position:
               
chrX:34270352-34270201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chrX:1728472-1728637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chrX:6544206-6544036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chrX:35268832-35268670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chrX:42855365-42855188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chrX:27431964-27432140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chrX:37072358-37072185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
30-175
               

               
Cow position:
               
chrX:13913019-13912872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chrX:11082670-11082833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chrX:31442877-31443041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chrX:34238665-34238501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chrX:48371044-48370876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
30-187
               

               
Cow position:
               
chrX:26625726-26625898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
30-187
               

               
Cow position:
               
chrX:37574794-37574635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
47-187
               

               
Cow position:
               
chrX:12437325-12437460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
50-175
               

               
Cow position:
               
chrX:45976798-45976674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
53-175
               

               
Cow position:
               
chrX:10916668-10916546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
55-180
               

               
Cow position:
               
chrX:29049881-29049756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 97
               

               
Conread position:
               
58-187
               

               
Cow position:
               
chrX:18812168-18812037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 107
               

               
Conread position:
               
61-180
               

               
Cow position:
               
chrX:25283239-25283360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
61-187
               

               
Cow position:
               
chrX:7382234-7382102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
62-187
               

               
Cow position:
               
chrX:16762676-16762550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 39
               
Show alignments to all cow chromosomes.