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Cow genome map

           
Conread name:
           
reru03c_c10.y1
        

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:56151136-56150860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 121
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:23659041-23658763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 274
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:12118326-12118046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:33299427-33299704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:10084043-10084330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 175
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:29648307-29648595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 175
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:52899585-52899881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:29058963-29058682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:7076288-7076580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 68
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:16045481-16045186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:28658390-28658096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 164
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:33407156-33407428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 82
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:89988-90270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:12585622-12585324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 273
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:55699654-55699345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:32218735-32218425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 69
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:20641960-20641650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:8967522-8967843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:10897179-10897496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:47183766-47183440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:4556868-4556530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:17324238-17324570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr18:4540354-4540017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 224
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr18:21721762-21721413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr18:37691078-37690745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr18:44262133-44262490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 329
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:16842554-16842198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:9712562-9712917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:9007666-9008015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 248
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:31672989-31672637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr18:55692329-55692689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 257
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr18:37334630-37334982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 166
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr18:11262481-11262834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 155
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr18:6878109-6877734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr18:11779185-11779542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:81283-81645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 17
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:13173008-13172628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr18:29387756-29388107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:32280810-32281184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 170
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:32860161-32860533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:2609199-2608832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:3179938-3180336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 168
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:54574800-54574393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:24342142-24342549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:25003364-25002948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 298
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:26938504-26938911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:29357120-29356695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:49543008-49543406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 91
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:1494808-1495236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:3098794-3098385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:10655975-10656367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:11190935-11191362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:11376883-11377297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 170
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:14815823-14815410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 394
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:18919420-18919024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 132
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:19193828-19193433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 176
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:24021909-24022309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 164
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:50082711-50082319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:51406373-51405973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 136
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:21682460-21682047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:7955665-7956082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 223
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:7964749-7965167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 274
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:4315823-4316262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:14048240-14048659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr18:11866867-11867290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:10861893-10861475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:19159444-19159018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 52
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:33606149-33606585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:40758730-40759162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 336
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:55697511-55697064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 346
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr18:5457732-5457212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:3416694-3416974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr18:28101145-28101432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 273
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr18:50637943-50637649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 178
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr18:51191233-51190941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr18:55782907-55782604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:16378489-16378791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr18:9974806-9974477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 138
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr18:11183458-11183792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr18:13293028-13293357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 259
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr18:45904378-45904047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:11243311-11243656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr18:22569508-22569169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 174
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr18:31997008-31997341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr18:22790548-22790172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr18:47314779-47314404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 277
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:19850226-19849823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 188
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:43284230-43283825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr18:42747101-42747528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:601651-601247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 247
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr18:51756618-51757053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr18:2864686-2864425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr18:7951735-7952011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr18:36346551-36346210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr18:35295081-35295430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:32908417-32908785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr18:39709410-39709783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 356
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr18:33756411-33756801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:26844136-26843733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 335
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:36458449-36458866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:52635561-52635146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 233
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:55589954-55589557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 123
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr18:33793218-33793648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 281
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr18:2270982-2270572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 334
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr18:4672864-4673238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr18:52457525-52457244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr18:17004776-17005190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 160
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr18:49655234-49655633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
8-356
               

               
Cow position:
               
chr18:9089231-9089592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
12-384
               

               
Cow position:
               
chr18:50993746-50993347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 361
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr18:35636818-35636415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 164
               

               
Conread position:
               
13-316
               

               
Cow position:
               
chr18:49161926-49161605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
13-370
               

               
Cow position:
               
chr18:33272476-33272845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 162
               

               
Conread position:
               
14-272
               

               
Cow position:
               
chr18:15859132-15859401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
14-334
               

               
Cow position:
               
chr18:20864516-20864854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr18:12270035-12270286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
19-278
               

               
Cow position:
               
chr18:51679337-51679073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
19-414
               

               
Cow position:
               
chr18:51691932-51691508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 382
               

               
Conread position:
               
19-418
               

               
Cow position:
               
chr18:51713173-51712742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 389
               

               
Conread position:
               
20-384
               

               
Cow position:
               
chr18:22121343-22120956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 170
               

               
Conread position:
               
20-392
               

               
Cow position:
               
chr18:5190142-5189755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 259
               

               
Conread position:
               
22-344
               

               
Cow position:
               
chr18:11322128-11322472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
23-292
               

               
Cow position:
               
chr18:19640339-19640616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 106
               

               
Conread position:
               
23-325
               

               
Cow position:
               
chr18:27078399-27078701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr18:27388093-27388415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
23-333
               

               
Cow position:
               
chr18:48818717-48818382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
23-382
               

               
Cow position:
               
chr18:55552505-55552895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 384
               

               
Conread position:
               
23-391
               

               
Cow position:
               
chr18:35075931-35076317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
23-421
               

               
Cow position:
               
chr18:7965812-7966216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 24
               

               
Conread position:
               
25-414
               

               
Cow position:
               
chr18:16418151-16417749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 151
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr18:21527952-21528242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
26-360
               

               
Cow position:
               
chr18:45570571-45570905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
31-391
               

               
Cow position:
               
chr18:7486800-7487183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 347
               

               
Conread position:
               
32-351
               

               
Cow position:
               
chr18:30360574-30360256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 246
               

               
Conread position:
               
33-269
               

               
Cow position:
               
chr18:11311596-11311358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 157
               

               
Conread position:
               
36-334
               

               
Cow position:
               
chr18:22092342-22092641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
39-343
               

               
Cow position:
               
chr18:47511555-47511873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
39-389
               

               
Cow position:
               
chr18:3166919-3166568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 60
               

               
Conread position:
               
40-332
               

               
Cow position:
               
chr18:51179187-51178883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
42-294
               

               
Cow position:
               
chr18:19362719-19362469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
107, 113
               

               
Conread position:
               
44-288
               

               
Cow position:
               
chr18:11618043-11618288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 189
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr18:13508156-13507841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
52-392
               

               
Cow position:
               
chr18:21195769-21195412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
53-333
               

               
Cow position:
               
chr18:34621794-34621497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
57-347
               

               
Cow position:
               
chr18:9029200-9029505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr18:9010307-9010609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
60-294
               

               
Cow position:
               
chr18:30248551-30248308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 215
               

               
Conread position:
               
61-302
               

               
Cow position:
               
chr18:20999036-20998791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
62-359
               

               
Cow position:
               
chr18:45961680-45961369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 178
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr18:18820075-18819851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
63-323
               

               
Cow position:
               
chr18:24491492-24491227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
160, 94
               

               
Conread position:
               
64-288
               

               
Cow position:
               
chr18:3027788-3027552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
69-288
               

               
Cow position:
               
chr18:46108793-46108566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
69-332
               

               
Cow position:
               
chr18:55462122-55461846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
69-415
               

               
Cow position:
               
chr18:39662361-39662734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 205
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr18:38606823-38607085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr18:14586894-14586625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
75-392
               

               
Cow position:
               
chr18:26937319-26937656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 202
               

               
Conread position:
               
75-412
               

               
Cow position:
               
chr18:36445022-36445391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 256
               

               
Conread position:
               
76-294
               

               
Cow position:
               
chr18:17380182-17380389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
76-304
               

               
Cow position:
               
chr18:7969808-7970041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr18:56362007-56361710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
77-391
               

               
Cow position:
               
chr18:1584611-1584299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
79-294
               

               
Cow position:
               
chr18:21751899-21752123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr18:19977380-19977048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 316
               

               
Conread position:
               
82-351
               

               
Cow position:
               
chr18:23447479-23447193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
84-294
               

               
Cow position:
               
chr18:4535383-4535167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr18:50927336-50927591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr18:4624826-4624541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr18:5486856-5487188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
94-370
               

               
Cow position:
               
chr18:35472326-35472042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 240
               

               
Conread position:
               
96-405
               

               
Cow position:
               
chr18:26286526-26286856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
97-293
               

               
Cow position:
               
chr18:15324157-15323955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
97-316
               

               
Cow position:
               
chr18:18340339-18340121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
97-316
               

               
Cow position:
               
chr18:38670491-38670263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
97-332
               

               
Cow position:
               
chr18:32244408-32244160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
97-391
               

               
Cow position:
               
chr18:7359356-7359676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
97-493
               

               
Cow position:
               
chr18:9818457-9818847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
99-390
               

               
Cow position:
               
chr18:29371483-29371799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
103-288
               

               
Cow position:
               
chr18:11671430-11671623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
103-340
               

               
Cow position:
               
chr18:54646111-54646352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
104-358
               

               
Cow position:
               
chr18:49665536-49665267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr18:15881232-15880995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr18:12776151-12775891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
106-351
               

               
Cow position:
               
chr18:11831766-11832016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
106-391
               

               
Cow position:
               
chr18:49200270-49200575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
107-392
               

               
Cow position:
               
chr18:41270711-41271021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
107-415
               

               
Cow position:
               
chr18:20174506-20174174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 294
               

               
Conread position:
               
108-335
               

               
Cow position:
               
chr18:2849636-2849390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
109-299
               

               
Cow position:
               
chr18:52650684-52650888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
114-332
               

               
Cow position:
               
chr18:29264820-29264591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
114-333
               

               
Cow position:
               
chr18:49660409-49660177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 163
               

               
Conread position:
               
114-392
               

               
Cow position:
               
chr18:10575743-10576035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
114-392
               

               
Cow position:
               
chr18:45104816-45104512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
22, 288
               

               
Conread position:
               
115-291
               

               
Cow position:
               
chr18:18627696-18627510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
115-349
               

               
Cow position:
               
chr18:45395625-45395887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr18:3150724-3150537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
117-513
               

               
Cow position:
               
chr18:48407424-48407838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr18:51826930-51827191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr18:46881043-46880869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
123-312
               

               
Cow position:
               
chr18:9846793-9846593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
125-292
               

               
Cow position:
               
chr18:51393597-51393431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
125-392
               

               
Cow position:
               
chr18:32121419-32121129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
128-292
               

               
Cow position:
               
chr18:23429428-23429598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
131-332
               

               
Cow position:
               
chr18:2099703-2099490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
135-295
               

               
Cow position:
               
chr18:56191552-56191383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
135-351
               

               
Cow position:
               
chr18:11811629-11811864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
138-364
               

               
Cow position:
               
chr18:4749226-4748978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
140-398
               

               
Cow position:
               
chr18:56172363-56172084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 257
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr18:45880358-45880115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
142-293
               

               
Cow position:
               
chr18:44802224-44802069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
143-316
               

               
Cow position:
               
chr18:8105283-8105099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
146-400
               

               
Cow position:
               
chr18:37703186-37702916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
148-325
               

               
Cow position:
               
chr18:52382367-52382546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
148-332
               

               
Cow position:
               
chr18:51298146-51298340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
149-391
               

               
Cow position:
               
chr18:56181788-56181532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 174
               

               
Conread position:
               
151-374
               

               
Cow position:
               
chr18:238675-238427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
152-311
               

               
Cow position:
               
chr18:29958476-29958315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
155-288
               

               
Cow position:
               
chr18:9365585-9365726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr18:11233104-11233358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 246
               

               
Conread position:
               
157-392
               

               
Cow position:
               
chr18:19273424-19273169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
161-379
               

               
Cow position:
               
chr18:6275495-6275740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
164-392
               

               
Cow position:
               
chr18:13359748-13359997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr18:1733507-1733297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr18:15025364-15025596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 205
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr18:47872801-47873023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
183-351
               

               
Cow position:
               
chr18:25647546-25647364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
183-398
               

               
Cow position:
               
chr18:33157524-33157754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
189-340
               

               
Cow position:
               
chr18:3115168-3115336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
189-351
               

               
Cow position:
               
chr18:23424636-23424807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
189-392
               

               
Cow position:
               
chr18:48290730-48290509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 205
               

               
Conread position:
               
189-515
               

               
Cow position:
               
chr18:10516856-10517208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
190-386
               

               
Cow position:
               
chr18:4649026-4648816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
190-391
               

               
Cow position:
               
chr18:11166688-11166912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
190-392
               

               
Cow position:
               
chr18:268102-267884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
191-392
               

               
Cow position:
               
chr18:16847408-16847625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
196-391
               

               
Cow position:
               
chr18:22214201-22214413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr18:47517493-47517262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr18:56159180-56159416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr18:25282839-25282599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
199-410
               

               
Cow position:
               
chr18:2569518-2569741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
204-391
               

               
Cow position:
               
chr18:2592450-2592236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 201
               

               
Conread position:
               
226-350
               

               
Cow position:
               
chr18:17649988-17649855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
226-390
               

               
Cow position:
               
chr18:48453441-48453619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
226-392
               

               
Cow position:
               
chr18:22056106-22055943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
226-414
               

               
Cow position:
               
chr18:7058978-7059176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
228-414
               

               
Cow position:
               
chr18:21205116-21205318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
235-390
               

               
Cow position:
               
chr18:24636271-24636431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
244-514
               

               
Cow position:
               
chr18:15340674-15340392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
401-511
               

               
Cow position:
               
chr18:12273641-12273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
402-511
               

               
Cow position:
               
chr18:42427604-42427717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
402-511
               

               
Cow position:
               
chr18:51405922-51405814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr18:20175210-20175099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr18:47416986-47417095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr18:52251873-52251759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
402-514
               

               
Cow position:
               
chr18:39662763-39662878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
403-514
               

               
Cow position:
               
chr18:4718244-4718359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
405-511
               

               
Cow position:
               
chr18:4495899-4495789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
405-512
               

               
Cow position:
               
chr18:5189706-5189595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
405-512
               

               
Cow position:
               
chr18:23821845-23821734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               
Show alignments to all cow chromosomes.