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Cow genome map

           
Conread name:
           
reru03c_c10.y1
        

               
Conread position:
               
1-271
               

               
Cow position:
               
chr21:6623763-6624031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr21:45659-45938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr21:4279249-4279542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 22
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr21:4905354-4905063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr21:5566594-5566903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 200
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr21:13728143-13727849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
190, 161
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr21:17433638-17433345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
138, 162
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr21:18935386-18935667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
148, 119
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr21:28477239-28477535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 214
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:30250591-30250293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 137
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr21:20549308-20548994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr21:44331677-44331367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr21:12338780-12339091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 183
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr21:46912157-46912460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr21:725274-724969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr21:23606289-23606599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr21:25603573-25603260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 182
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr21:9711101-9710766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr21:19702138-19702453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 308
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr21:17219005-17218672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr21:33263465-33263792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 187
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr21:20262720-20262389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr21:24297146-24296819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr21:24130700-24131037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:642960-643286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:2420119-2420459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 197
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:5898796-5898441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:30626567-30626221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:44514881-44515221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr21:19766469-19766815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr21:34254665-34254319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr21:43240478-43240827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 22
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr21:5153231-5153578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 169
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr21:18289278-18289632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr21:33209813-33210166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 173
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr21:2904849-2904493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 277
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:5649520-5649891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 239
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr21:7564708-7564333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 239
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr21:28512155-28512513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 164
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr21:4098503-4098857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr21:33983195-33982819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr21:27341971-27341605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr21:4079968-4080371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 234
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr21:12366001-12366394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr21:12153751-12154154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr21:7672736-7673142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 307
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr21:44566082-44565696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr21:26829621-26829232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 173
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr21:35898007-35897619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 173
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr21:24698091-24698506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:912347-911938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 130
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:9863011-9862616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:10263654-10264061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:13897807-13898214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 190
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:17412678-17412270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 189
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:25764249-25764661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:26244552-26244947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:28881763-28882164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 182
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:37706803-37706391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 132
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:40244048-40244469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 402
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:42500650-42501068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 109
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:42914130-42913716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 90
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:46973521-46973104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:48484826-48484418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 182
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr21:1463847-1464261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 189
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr21:22855836-22856253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr21:27863906-27863482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 403
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr21:4998871-4998451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 333
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr21:14760192-14760606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr21:36756222-36756632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 279
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr21:17478999-17479409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 96
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr21:29942610-29943038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr21:22719160-22718736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 47
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr21:38917849-38918251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 90
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr21:4282250-4281824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 172
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr21:32535599-32536028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr21:5455376-5454939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 231
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr21:34658652-34659178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr21:13300767-13301280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr21:7717173-7716637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr21:45866553-45867085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 91
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr21:13163538-13164056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr21:41957569-41957015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 358
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr21:36297111-36297368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr21:25158508-25158792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 188
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr21:32297887-32297601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 221
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr21:45263405-45263116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr21:17411053-17410750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 176
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr21:28599386-28599684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr21:28442351-28442658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 67
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr21:36909436-36909745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr21:2366956-2367273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr21:12616758-12617080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr21:48262745-48263080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 173
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr21:48638128-48637791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr21:937667-938049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 174
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr21:9201802-9202206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr21:44826250-44825863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr21:393637-394048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr21:18494595-18494998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 67
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr21:20925890-20925477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 137
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr21:33997610-33997200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr21:39401209-39401645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr21:34738215-34738772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:9981072-9980817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 125
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr21:31576124-31576463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr21:37299082-37299480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr21:15584787-15584393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 164
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr21:21480563-21480154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 219
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr21:24607012-24607414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr21:47823656-47823246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 192
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr21:34391350-34390923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 140
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr21:4794838-4795171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:44108638-44109030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 87
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr21:42464228-42463863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr21:2657212-2657472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 168
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr21:16612250-16612568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 267
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr21:38691816-38692129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
8-330
               

               
Cow position:
               
chr21:36163341-36163004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr21:43937-44261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr21:31158876-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr21:38900401-38900805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
10-344
               

               
Cow position:
               
chr21:16789344-16789678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 280
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr21:30232075-30231776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr21:18934551-18934824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr21:15530979-15531267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 192
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr21:3635103-3634775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
117, 182
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr21:13395178-13395514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
14-392
               

               
Cow position:
               
chr21:45971525-45971141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
15-332
               

               
Cow position:
               
chr21:7582277-7581948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 174
               

               
Conread position:
               
15-392
               

               
Cow position:
               
chr21:23586490-23586909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 124
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr21:28429078-28429488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr21:23984653-23984372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
19-315
               

               
Cow position:
               
chr21:45474123-45473815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 134
               

               
Conread position:
               
19-390
               

               
Cow position:
               
chr21:9415875-9416275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 119
               

               
Conread position:
               
19-391
               

               
Cow position:
               
chr21:4399432-4399831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 172
               

               
Conread position:
               
20-350
               

               
Cow position:
               
chr21:45151998-45151636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
21-365
               

               
Cow position:
               
chr21:81704-82056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
22-325
               

               
Cow position:
               
chr21:220595-220910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
22-361
               

               
Cow position:
               
chr21:46777338-46776986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 338
               

               
Conread position:
               
22-392
               

               
Cow position:
               
chr21:44671388-44671780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 317
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr21:29069690-29069369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
23-417
               

               
Cow position:
               
chr21:23785652-23786086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 375
               

               
Conread position:
               
24-316
               

               
Cow position:
               
chr21:37479596-37479902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 152
               

               
Conread position:
               
25-388
               

               
Cow position:
               
chr21:30990628-30990253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
25-414
               

               
Cow position:
               
chr21:42384144-42384559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 153
               

               
Conread position:
               
31-354
               

               
Cow position:
               
chr21:21411774-21411428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
31-404
               

               
Cow position:
               
chr21:42190514-42190136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 101
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr21:28029046-28029344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
43-340
               

               
Cow position:
               
chr21:641243-641555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
44-391
               

               
Cow position:
               
chr21:16188152-16187781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 153
               

               
Conread position:
               
50-350
               

               
Cow position:
               
chr21:13048533-13048212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr21:42905706-42905347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr21:31691146-31691369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr21:19196503-19196202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
54-316
               

               
Cow position:
               
chr21:35899478-35899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr21:8985217-8985574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 342
               

               
Conread position:
               
57-288
               

               
Cow position:
               
chr21:24857981-24858221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr21:20045098-20044831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr21:38120775-38121061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
60-398
               

               
Cow position:
               
chr21:7132788-7132432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
62-275
               

               
Cow position:
               
chr21:29225384-29225170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
62-310
               

               
Cow position:
               
chr21:24887672-24887935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 259
               

               
Conread position:
               
62-391
               

               
Cow position:
               
chr21:41974702-41974347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
63-332
               

               
Cow position:
               
chr21:17282379-17282663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
63-335
               

               
Cow position:
               
chr21:28993951-28993661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 277
               

               
Conread position:
               
63-375
               

               
Cow position:
               
chr21:47760453-47760782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 289
               

               
Conread position:
               
68-391
               

               
Cow position:
               
chr21:46849438-46849099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
70-269
               

               
Cow position:
               
chr21:26097727-26097524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:6833735-6834079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
79, 328
               

               
Conread position:
               
70-397
               

               
Cow position:
               
chr21:42414416-42414068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
70-399
               

               
Cow position:
               
chr21:34010705-34010361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
71-340
               

               
Cow position:
               
chr21:34653770-34654045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
73-310
               

               
Cow position:
               
chr21:40265519-40265769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
73-395
               

               
Cow position:
               
chr21:47802575-47802230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
73-414
               

               
Cow position:
               
chr21:13128410-13128045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
75-316
               

               
Cow position:
               
chr21:18712974-18713226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
76-300
               

               
Cow position:
               
chr21:18850537-18850304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 205
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr21:40786361-40786579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr21:426482-426712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
78-284
               

               
Cow position:
               
chr21:11740439-11740229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
78-316
               

               
Cow position:
               
chr21:12973560-12973310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
78-331
               

               
Cow position:
               
chr21:31278473-31278735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
82-332
               

               
Cow position:
               
chr21:36762744-36762998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 191
               

               
Conread position:
               
82-395
               

               
Cow position:
               
chr21:32236994-32237328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
87-340
               

               
Cow position:
               
chr21:11707050-11706776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
88-392
               

               
Cow position:
               
chr21:10726981-10727306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
7, 309
               

               
Conread position:
               
92-272
               

               
Cow position:
               
chr21:27406499-27406321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
92-392
               

               
Cow position:
               
chr21:28734207-28733885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 306
               

               
Conread position:
               
97-348
               

               
Cow position:
               
chr21:5459686-5459432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
97-392
               

               
Cow position:
               
chr21:25127320-25127631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
97-392
               

               
Cow position:
               
chr21:40058515-40058835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
99-340
               

               
Cow position:
               
chr21:2679271-2679525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
102-310
               

               
Cow position:
               
chr21:29954712-29954500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 171
               

               
Conread position:
               
105-392
               

               
Cow position:
               
chr21:30607385-30607060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 309
               

               
Conread position:
               
105-414
               

               
Cow position:
               
chr21:39889026-39888698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
108-334
               

               
Cow position:
               
chr21:42023856-42024082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
108-413
               

               
Cow position:
               
chr21:33562735-33563058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
111-392
               

               
Cow position:
               
chr21:41155586-41155891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
114-414
               

               
Cow position:
               
chr21:17643236-17642933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
115-351
               

               
Cow position:
               
chr21:44114402-44114152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
116-390
               

               
Cow position:
               
chr21:36795329-36795627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr21:16166901-16166653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
121-303
               

               
Cow position:
               
chr21:26241562-26241750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
123-274
               

               
Cow position:
               
chr21:33350481-33350633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr21:44252090-44251817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
125-413
               

               
Cow position:
               
chr21:3585618-3585318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
125-459
               

               
Cow position:
               
chr21:15445339-15444972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr21:21223024-21223309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 217
               

               
Conread position:
               
131-332
               

               
Cow position:
               
chr21:49700293-49700076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr21:23150273-23150078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
134-360
               

               
Cow position:
               
chr21:39403791-39403547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr21:40899086-40899352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
136-392
               

               
Cow position:
               
chr21:23322332-23322049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 267
               

               
Conread position:
               
143-373
               

               
Cow position:
               
chr21:13410067-13409813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr21:5636965-5636693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 195
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr21:33490-33750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
155-340
               

               
Cow position:
               
chr21:42348909-42348705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr21:27124359-27124114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr21:8351530-8351277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
160-288
               

               
Cow position:
               
chr21:11877158-11877289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
163-514
               

               
Cow position:
               
chr21:24797472-24797851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
168-350
               

               
Cow position:
               
chr21:31676284-31676482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
182-374
               

               
Cow position:
               
chr21:13585260-13585063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
183-400
               

               
Cow position:
               
chr21:12801947-12801715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr21:1058876-1059131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
189-414
               

               
Cow position:
               
chr21:27521521-27521281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
189-443
               

               
Cow position:
               
chr21:18940753-18940497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
189-513
               

               
Cow position:
               
chr21:42465633-42465985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
190-332
               

               
Cow position:
               
chr21:29484789-29484937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
191-410
               

               
Cow position:
               
chr21:10000892-10001122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr21:15610962-15611171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr21:5426757-5426970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
196-397
               

               
Cow position:
               
chr21:3047497-3047710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr21:40589671-40589433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr21:18790733-18790510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
213-392
               

               
Cow position:
               
chr21:712765-712956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
213-398
               

               
Cow position:
               
chr21:37361638-37361441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
226-392
               

               
Cow position:
               
chr21:28244319-28244498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
401-515
               

               
Cow position:
               
chr21:37706335-37706217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
402-510
               

               
Cow position:
               
chr21:31659066-31658958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
402-511
               

               
Cow position:
               
chr21:44724287-44724179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr21:26018460-26018573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr21:32339659-32339545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
402-512
               

               
Cow position:
               
chr21:42131274-42131160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
402-515
               

               
Cow position:
               
chr21:4281794-4281682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 45
               
Show alignments to all cow chromosomes.