Cow genome map

Conread name: reru03c_c10.y1

Conread position: 1-266
Cow position: chr24:15372645-15372917 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 168

Conread position: 1-267
Cow position: chr24:39913941-39914208 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 190, 153

Conread position: 1-268
Cow position: chr24:39238324-39238596 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-272
Cow position: chr24:32070188-32070472 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 179

Conread position: 1-274
Cow position: chr24:27732636-27732351 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 233

Conread position: 1-274
Cow position: chr24:43506986-43506712 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 80

Conread position: 1-276
Cow position: chr24:22193252-22193530 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 101

Conread position: 1-284
Cow position: chr24:45216589-45216297 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-286
Cow position: chr24:16844809-16844512 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 29

Conread position: 1-288
Cow position: chr24:5141458-5141762 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-288
Cow position: chr24:11118813-11119099 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 89, 162

Conread position: 1-288
Cow position: chr24:38655570-38655270 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-292
Cow position: chr24:31811714-31812008 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 26

Conread position: 1-293
Cow position: chr24:37037140-37037437 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 275

Conread position: 1-309
Cow position: chr24:17364125-17363808 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 129, 153

Conread position: 1-310
Cow position: chr24:4616220-4615899 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-310
Cow position: chr24:28062473-28062787 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 1-316
Cow position: chr24:202107-201779 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 230

Conread position: 1-316
Cow position: chr24:31308952-31309270 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 79

Conread position: 1-316
Cow position: chr24:33239026-33238693 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-325
Cow position: chr24:19466406-19466065 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 1-330
Cow position: chr24:23616221-23616562 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-331
Cow position: chr24:40974521-40974869 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 149, 38

Conread position: 1-332
Cow position: chr24:14279413-14279764 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-332
Cow position: chr24:18266636-18266295 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 7

Conread position: 1-332
Cow position: chr24:18732587-18732253 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 45

Conread position: 1-332
Cow position: chr24:36486536-36486187 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 56

Conread position: 1-332
Cow position: chr24:39492829-39493165 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 1-334
Cow position: chr24:24250250-24250600 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 338

Conread position: 1-335
Cow position: chr24:11876408-11876756 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 1-340
Cow position: chr24:11886690-11887041 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 1-344
Cow position: chr24:33372084-33372436 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 165

Conread position: 1-346
Cow position: chr24:11064396-11064738 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 91

Conread position: 1-350
Cow position: chr24:5849885-5849511 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 19

Conread position: 1-350
Cow position: chr24:32693231-32693600 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 169

Conread position: 1-354
Cow position: chr24:32158748-32158376 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 42

Conread position: 1-358
Cow position: chr24:11006739-11007117 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 364

Conread position: 1-361
Cow position: chr24:17406923-17407298 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 1-361
Cow position: chr24:24002504-24002883 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 369

Conread position: 1-370
Cow position: chr24:7030623-7030262 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 79, 160

Conread position: 1-376
Cow position: chr24:5652439-5652063 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 134

Conread position: 1-380
Cow position: chr24:15666882-15666480 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 17

Conread position: 1-391
Cow position: chr24:6149559-6149962 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 75

Conread position: 1-391
Cow position: chr24:29064117-29063714 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 170

Conread position: 1-392
Cow position: chr24:6154356-6154752 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 130

Conread position: 1-392
Cow position: chr24:18970977-18970566 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 11

Conread position: 1-392
Cow position: chr24:27290402-27290810 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 179

Conread position: 1-392
Cow position: chr24:27905954-27906379 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 409

Conread position: 1-392
Cow position: chr24:29679781-29679368 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 97

Conread position: 1-392
Cow position: chr24:30484408-30484009 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 181

Conread position: 1-392
Cow position: chr24:32370391-32369977 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 280

Conread position: 1-392
Cow position: chr24:39441031-39440613 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 168

Conread position: 1-392
Cow position: chr24:40129647-40130068 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 1-398
Cow position: chr24:15247094-15246699 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 1-398
Cow position: chr24:36555302-36554888 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-414
Cow position: chr24:11839706-11840150 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 189

Conread position: 1-414
Cow position: chr24:17105038-17104607 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 1-414
Cow position: chr24:18742044-18741609 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 158

Conread position: 1-414
Cow position: chr24:27052963-27052531 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 11

Conread position: 1-414
Cow position: chr24:29360451-29360033 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 87

Conread position: 1-414
Cow position: chr24:32205277-32204831 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 408

Conread position: 1-414
Cow position: chr24:34564651-34565087 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 38

Conread position: 1-414
Cow position: chr24:40056193-40055767 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 173

Conread position: 1-415
Cow position: chr24:28554032-28553590 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 290

Conread position: 1-415
Cow position: chr24:43432306-43432755 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 1-498
Cow position: chr24:27809705-27810250 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 278

Conread position: 1-511
Cow position: chr24:27754218-27754717 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 235

Conread position: 2-291
Cow position: chr24:27763330-27763622 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 27

Conread position: 2-295
Cow position: chr24:18025437-18025145 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 48

Conread position: 2-328
Cow position: chr24:38479420-38479104 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 90

Conread position: 2-410
Cow position: chr24:29596279-29595850 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 112

Conread position: 2-516
Cow position: chr24:28689243-28689779 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 3-295
Cow position: chr24:27844992-27844691 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 3-334
Cow position: chr24:6141428-6141087 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 230

Conread position: 3-366
Cow position: chr24:33621958-33621573 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 334

Conread position: 3-392
Cow position: chr24:28303822-28303427 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 330

Conread position: 3-414
Cow position: chr24:33943930-33944365 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 314
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 146, 13

Conread position: 4-350
Cow position: chr24:38814503-38814862 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 172

Conread position: 4-504
Cow position: chr24:2731050-2730517 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 357
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 77

Conread position: 5-292
Cow position: chr24:32609164-32609464 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 8-331
Cow position: chr24:33098960-33098620 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 271

Conread position: 8-392
Cow position: chr24:6450065-6450438 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 168

Conread position: 8-410
Cow position: chr24:28721414-28721848 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 42

Conread position: 9-295
Cow position: chr24:3153051-3152752 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 193

Conread position: 9-351
Cow position: chr24:28353693-28354045 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 180

Conread position: 11-303
Cow position: chr24:36710678-36710978 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 14

Conread position: 13-414
Cow position: chr24:39219304-39218877 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 75

Conread position: 14-388
Cow position: chr24:33730398-33730781 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 172

Conread position: 18-392
Cow position: chr24:27148950-27149337 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 171

Conread position: 20-391
Cow position: chr24:814717-814331 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 156

Conread position: 20-392
Cow position: chr24:44987828-44987437 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 99

Conread position: 21-390
Cow position: chr24:27874152-27874542 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 68

Conread position: 22-294
Cow position: chr24:42862219-42862474 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 41

Conread position: 22-392
Cow position: chr24:29673067-29673461 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 59

Conread position: 23-288
Cow position: chr24:2391739-2392013 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 23-355
Cow position: chr24:16625949-16625607 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 9

Conread position: 24-388
Cow position: chr24:20970243-20969862 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 250

Conread position: 25-302
Cow position: chr24:15472902-15473191 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 165

Conread position: 26-392
Cow position: chr24:18485448-18485056 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 37

Conread position: 35-389
Cow position: chr24:7917808-7917424 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 32

Conread position: 36-407
Cow position: chr24:21264945-21264555 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 188

Conread position: 38-389
Cow position: chr24:3631080-3631447 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 281

Conread position: 40-349
Cow position: chr24:17980780-17981084 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 63

Conread position: 42-293
Cow position: chr24:30514958-30515215 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 115

Conread position: 45-395
Cow position: chr24:19658115-19658502 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 364

Conread position: 49-304
Cow position: chr24:211555-211815 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 100, 225

Conread position: 51-288
Cow position: chr24:37246642-37246396 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 0

Conread position: 51-392
Cow position: chr24:3493472-3493827 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 41

Conread position: 51-414
Cow position: chr24:42581254-42580878 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 22

Conread position: 51-420
Cow position: chr24:6161272-6160876 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 143

Conread position: 52-391
Cow position: chr24:30235455-30235807 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 170

Conread position: 60-392
Cow position: chr24:12851322-12851657 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 103

Conread position: 62-325
Cow position: chr24:42102958-42103234 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 22

Conread position: 63-326
Cow position: chr24:37205285-37205015 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 39

Conread position: 63-414
Cow position: chr24:32054259-32054624 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 228

Conread position: 63-414
Cow position: chr24:43363949-43364324 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 41

Conread position: 64-354
Cow position: chr24:29606472-29606173 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 35

Conread position: 64-392
Cow position: chr24:28690286-28690626 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 85, 28

Conread position: 72-389
Cow position: chr24:2674929-2675259 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 77

Conread position: 75-359
Cow position: chr24:32668880-32669184 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 115, 21

Conread position: 77-351
Cow position: chr24:32014726-32015021 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 46

Conread position: 77-351
Cow position: chr24:44054537-44054266 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 31

Conread position: 77-384
Cow position: chr24:6071200-6071531 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 99

Conread position: 77-392
Cow position: chr24:6340620-6340953 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 15

Conread position: 81-392
Cow position: chr24:44041400-44041070 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 71

Conread position: 87-351
Cow position: chr24:3165437-3165712 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 62, 68

Conread position: 93-340
Cow position: chr24:14648708-14648469 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 6

Conread position: 95-332
Cow position: chr24:11875002-11874761 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 9

Conread position: 97-316
Cow position: chr24:37650301-37650525 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 79

Conread position: 99-288
Cow position: chr24:39483100-39483295 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 107

Conread position: 99-334
Cow position: chr24:33153412-33153649 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 39

Conread position: 99-358
Cow position: chr24:20923226-20923485 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 50, 77

Conread position: 99-390
Cow position: chr24:27543852-27543538 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 236

Conread position: 100-334
Cow position: chr24:23556703-23556455 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 101-374
Cow position: chr24:25320619-25320920 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 6

Conread position: 105-320
Cow position: chr24:20874310-20874540 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 51

Conread position: 106-392
Cow position: chr24:18405673-18405379 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 132

Conread position: 107-332
Cow position: chr24:6956816-6957048 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 54

Conread position: 108-292
Cow position: chr24:39850244-39850055 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 165

Conread position: 108-334
Cow position: chr24:15288490-15288733 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 231

Conread position: 111-290
Cow position: chr24:634626-634809 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 163

Conread position: 111-316
Cow position: chr24:24491374-24491155 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 65

Conread position: 114-267
Cow position: chr24:4724667-4724820 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 74

Conread position: 116-373
Cow position: chr24:29027693-29027967 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 67

Conread position: 122-290
Cow position: chr24:20225384-20225561 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 122-340
Cow position: chr24:38374935-38375166 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 56

Conread position: 122-392
Cow position: chr24:27267285-27267575 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 54

Conread position: 124-340
Cow position: chr24:34532772-34533009 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 125-440
Cow position: chr24:7301108-7301454 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 36

Conread position: 126-315
Cow position: chr24:28233041-28233246 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 65

Conread position: 131-392
Cow position: chr24:38347335-38347625 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 275

Conread position: 132-294
Cow position: chr24:21252793-21252622 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 132-303
Cow position: chr24:5435385-5435210 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 45

Conread position: 132-351
Cow position: chr24:5754498-5754734 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 133-328
Cow position: chr24:34272460-34272669 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 137-392
Cow position: chr24:34315023-34315295 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 7

Conread position: 138-288
Cow position: chr24:28319543-28319382 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 144-354
Cow position: chr24:20988330-20988098 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 116

Conread position: 144-391
Cow position: chr24:17311540-17311279 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 201

Conread position: 148-331
Cow position: chr24:40908690-40908891 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 150-334
Cow position: chr24:26929273-26929072 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 155-398
Cow position: chr24:27341343-27341074 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 247

Conread position: 155-443
Cow position: chr24:29781843-29782156 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 305

Conread position: 159-374
Cow position: chr24:6914076-6913841 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 11

Conread position: 161-340
Cow position: chr24:30177923-30178116 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 172

Conread position: 161-414
Cow position: chr24:15861910-15861635 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 28

Conread position: 167-335
Cow position: chr24:31159319-31159490 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 110

Conread position: 169-332
Cow position: chr24:19804381-19804561 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 168

Conread position: 169-514
Cow position: chr24:18333376-18333027 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 173-384
Cow position: chr24:28600155-28599932 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 91

Conread position: 173-414
Cow position: chr24:19535545-19535293 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 48

Conread position: 183-411
Cow position: chr24:30545146-30544900 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 143

Conread position: 189-388
Cow position: chr24:18324330-18324559 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 217

Conread position: 189-392
Cow position: chr24:35073808-35074034 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 210

Conread position: 190-391
Cow position: chr24:23685344-23685130 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 197

Conread position: 190-392
Cow position: chr24:17860534-17860320 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 84

Conread position: 190-392
Cow position: chr24:30229183-30229412 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 213

Conread position: 196-391
Cow position: chr24:27967803-27968018 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 135

Conread position: 196-474
Cow position: chr24:16268380-16268104 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 100

Conread position: 196-511
Cow position: chr24:25424786-25425136 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 275

Conread position: 197-392
Cow position: chr24:19769222-19769429 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 76

Conread position: 199-392
Cow position: chr24:18390562-18390347 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 204-392
Cow position: chr24:5151966-5152174 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 194

Conread position: 205-371
Cow position: chr24:16994626-16994807 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 207-384
Cow position: chr24:21860486-21860290 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 188

Conread position: 207-415
Cow position: chr24:24755189-24755409 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 14

Conread position: 213-392
Cow position: chr24:8886659-8886851 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 162

Conread position: 214-392
Cow position: chr24:29388989-29389182 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 395-512
Cow position: chr24:16640894-16641017 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 402-511
Cow position: chr24:39904011-39903899 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 402-512
Cow position: chr24:161996-162110 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 402-512
Cow position: chr24:18874828-18874716 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 73

Conread position: 402-515
Cow position: chr24:7113215-7113332 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.