Cow genome map

Conread name: reru03c_c10.y1

Conread position: 1-259
Cow position:
Alignm length: 265
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 161

Conread position: 1-269
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 126

Conread position: 1-269
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 81

Conread position: 1-278
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 95

Conread position: 1-288
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 18

Conread position: 1-292
Cow position:
Alignm length: 304
Alignm identity: 218
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 129

Conread position: 1-295
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 136

Conread position: 1-303
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 60

Conread position: 1-312
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 1-312
Cow position:
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 167

Conread position: 1-315
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 29

Conread position: 1-316
Cow position:
Alignm length: 331
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 19

Conread position: 1-329
Cow position:
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 82

Conread position: 1-334
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 175

Conread position: 1-334
Cow position:
Alignm length: 348
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 148, 75

Conread position: 1-340
Cow position:
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 190

Conread position: 1-340
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-340
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 80

Conread position: 1-344
Cow position:
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 30

Conread position: 1-350
Cow position:
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 111

Conread position: 1-350
Cow position:
Alignm length: 373
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 312

Conread position: 1-351
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 1-351
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 189

Conread position: 1-374
Cow position:
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-384
Cow position:
Alignm length: 398
Alignm identity: 277
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 58

Conread position: 1-388
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 1-391
Cow position:
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 179

Conread position: 1-391
Cow position:
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 146

Conread position: 1-391
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 189, 45

Conread position: 1-391
Cow position:
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 142

Conread position: 1-392
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 162

Conread position: 1-392
Cow position:
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 144

Conread position: 1-392
Cow position:
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 17

Conread position: 1-392
Cow position:
Alignm length: 411
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 378

Conread position: 1-392
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 167

Conread position: 1-398
Cow position:
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 402

Conread position: 1-414
Cow position:
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 148

Conread position: 1-414
Cow position:
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 235

Conread position: 1-415
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 1-498
Cow position:
Alignm length: 534
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 199

Conread position: 1-498
Cow position:
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 2-292
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 2-294
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 2-332
Cow position:
Alignm length: 338
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 180

Conread position: 2-340
Cow position:
Alignm length: 360
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 109

Conread position: 2-350
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 28

Conread position: 2-390
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 372

Conread position: 2-420
Cow position:
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 338

Conread position: 3-332
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 172

Conread position: 3-356
Cow position:
Alignm length: 374
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 3-439
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 77

Conread position: 6-269
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 185

Conread position: 6-284
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 143, 73

Conread position: 6-350
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 93

Conread position: 7-267
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 142, 0

Conread position: 7-293
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 7-312
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 222

Conread position: 7-414
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 398

Conread position: 8-290
Cow position:
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 168

Conread position: 8-400
Cow position:
Alignm length: 416
Alignm identity: 289
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 182, 19

Conread position: 12-332
Cow position:
Alignm length: 343
Alignm identity: 246
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 331

Conread position: 13-267
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 120

Conread position: 14-316
Cow position:
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 14-332
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 105

Conread position: 14-335
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 14-351
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 44

Conread position: 20-360
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 156

Conread position: 21-335
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 26-340
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 31-414
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 209

Conread position: 39-287
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 110, 80

Conread position: 41-398
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 35

Conread position: 47-391
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 121

Conread position: 55-368
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 274

Conread position: 58-286
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 91, 118

Conread position: 58-351
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 12

Conread position: 61-300
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 214

Conread position: 62-291
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 162

Conread position: 64-336
Cow position:
Alignm length: 285
Alignm identity: 203
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 87, 119

Conread position: 64-392
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 79

Conread position: 70-288
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 82, 42

Conread position: 71-316
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 26

Conread position: 71-414
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 208

Conread position: 76-391
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 101

Conread position: 81-350
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 85-334
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 106, 64

Conread position: 88-374
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 89-350
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 62, 261

Conread position: 92-341
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 98, 38

Conread position: 105-332
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 69

Conread position: 105-358
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 85

Conread position: 109-287
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 89

Conread position: 114-292
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 112

Conread position: 114-316
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 122-288
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 122-356
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 37

Conread position: 122-399
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 43

Conread position: 122-400
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 8

Conread position: 122-414
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 298

Conread position: 125-392
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 7

Conread position: 125-415
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 278

Conread position: 128-292
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 130-307
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 7

Conread position: 132-316
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 70

Conread position: 138-382
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 33

Conread position: 141-316
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 101

Conread position: 143-288
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 151-391
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 124

Conread position: 155-288
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 160-358
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 113

Conread position: 164-398
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 157

Conread position: 166-294
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 73

Conread position: 181-351
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 143

Conread position: 189-359
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 31

Conread position: 189-381
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 212

Conread position: 189-392
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 142

Conread position: 191-389
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 194

Conread position: 196-392
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 196

Conread position: 196-409
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 64

Conread position: 199-392
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 89, 27

Conread position: 205-410
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 111

Conread position: 209-414
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 176

Conread position: 213-393
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 59

Conread position: 229-331
Cow position:
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 41

Conread position: 402-511
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 402-512
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 402-512
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 403-513
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.