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Cow genome map

           
Conread name:
           
reru03c_c10.y1
        

               
Conread position:
               
1-264
               

               
Cow position:
               
chr29:37617704-37617967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 188
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr29:23240064-23240330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr29:24345915-24345642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr29:457497-457213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 273
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr29:10674565-10674848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr29:961472-961760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 120
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr29:29302482-29302186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr29:45208279-45208569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr29:26778440-26778731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 175
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr29:686642-686347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 272
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr29:629185-629478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
190, 75
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr29:133733-134075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr29:13041010-13040674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr29:34535682-34535344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr29:5948248-5947910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr29:4220935-4221264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 183
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr29:36242886-36243230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr29:7959981-7959626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr29:44009268-44008935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr29:649812-650170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 349
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr29:2744722-2744379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr29:45006067-45005732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 325
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr29:1934011-1933650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr29:10156737-10156401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 25
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr29:12005216-12004862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr29:18072477-18072841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 185
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr29:39531978-39531623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 106
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr29:2188799-2188430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 86
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr29:15738796-15738424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 240
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr29:15944121-15944491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr29:6150518-6150174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr29:9638763-9638398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 305
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr29:29065976-29066341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 333
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr29:9332693-9333065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 355
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr29:732175-732545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 187
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr29:10225482-10225117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr29:2589360-2588967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr29:3584575-3584213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr29:26130343-26130730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr29:35434419-35434814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 367
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr29:19792717-19792313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr29:11684550-11684968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 342
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr29:18212448-18212032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr29:41812025-41811626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 171
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr29:9911705-9912135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:17543-17147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 80
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:2136556-2136148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 281
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:6925567-6925975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 275
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:24952230-24952652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:32800154-32799744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:39567238-39567651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr29:45650779-45650379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr29:26263403-26263800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr29:43495619-43496015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:4120402-4120819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr29:36216670-36217088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr29:42771227-42771631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr29:11696083-11696515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 168
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr29:19428216-19428644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 179
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr29:22935836-22936257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 103
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr29:32290152-32290594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr29:34746105-34745672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 392
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr29:40096514-40096952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 222
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr29:28775909-28775471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr29:4875355-4875071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr29:25423387-25423677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr29:6775435-6775112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 140
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr29:21665525-21665848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 178
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr29:36530414-36530745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr29:19761825-19762169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 187
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr29:19755997-19756366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 333
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr29:1324988-1325366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 226
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr29:36586127-36586535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 197
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr29:20429412-20429122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 56
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr29:21443795-21443490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 273
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr29:12309550-12309887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 96
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr29:2415256-2414918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 162
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr29:87461-87112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr29:11365798-11366157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 187
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr29:17408883-17409257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 204
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr29:17132068-17131635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 316
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr29:15289282-15289587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr29:32732886-32733209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 155
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr29:18749028-18748720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 173
               

               
Conread position:
               
12-302
               

               
Cow position:
               
chr29:21197091-21196797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 291
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr29:20933266-20933667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 370
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr29:44233381-44233073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 85
               

               
Conread position:
               
14-386
               

               
Cow position:
               
chr29:25088296-25088708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 340
               

               
Conread position:
               
14-399
               

               
Cow position:
               
chr29:35291660-35292059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 262
               

               
Conread position:
               
14-510
               

               
Cow position:
               
chr29:27005447-27005967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 177
               

               
Conread position:
               
15-333
               

               
Cow position:
               
chr29:32308760-32308428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr29:4480610-4480314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 214
               

               
Conread position:
               
16-351
               

               
Cow position:
               
chr29:35459193-35458859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
16-389
               

               
Cow position:
               
chr29:24623807-24624207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr29:7560833-7560551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr29:17606985-17607253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
22-351
               

               
Cow position:
               
chr29:17109542-17109887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 129
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr29:13127545-13127230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
24-334
               

               
Cow position:
               
chr29:35406213-35405897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 129
               

               
Conread position:
               
25-368
               

               
Cow position:
               
chr29:6635677-6636031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
26-514
               

               
Cow position:
               
chr29:35281077-35281595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 367
               

               
Conread position:
               
31-292
               

               
Cow position:
               
chr29:26017931-26017669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
31-334
               

               
Cow position:
               
chr29:28689189-28689510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr29:26335801-26335539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
34-391
               

               
Cow position:
               
chr29:17543031-17543405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
34-391
               

               
Cow position:
               
chr29:20626169-20626539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr29:8126008-8125748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 236
               

               
Conread position:
               
45-400
               

               
Cow position:
               
chr29:23874051-23874429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
47-294
               

               
Cow position:
               
chr29:40621334-40621084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
51-332
               

               
Cow position:
               
chr29:20674209-20673906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
52-332
               

               
Cow position:
               
chr29:40894542-40894827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
53-340
               

               
Cow position:
               
chr29:35502045-35501747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
54-292
               

               
Cow position:
               
chr29:43081006-43080767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 138
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr29:28195910-28195549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
62-392
               

               
Cow position:
               
chr29:31926681-31926325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 195
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr29:8891314-8891005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
63-390
               

               
Cow position:
               
chr29:28868242-28868597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 277
               

               
Conread position:
               
69-358
               

               
Cow position:
               
chr29:28197391-28197083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr29:26771043-26771398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 339
               

               
Conread position:
               
72-514
               

               
Cow position:
               
chr29:7041214-7040741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
73-334
               

               
Cow position:
               
chr29:43328259-43328535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
74-292
               

               
Cow position:
               
chr29:26616114-26615880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 212
               

               
Conread position:
               
74-300
               

               
Cow position:
               
chr29:2715759-2715996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 205
               

               
Conread position:
               
77-292
               

               
Cow position:
               
chr29:35484870-35485093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr29:40117197-40117487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
78-398
               

               
Cow position:
               
chr29:3704573-3704231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
81-332
               

               
Cow position:
               
chr29:2071939-2071680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr29:38581601-38581812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr29:16302660-16302419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
89-350
               

               
Cow position:
               
chr29:4625356-4625079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
89-358
               

               
Cow position:
               
chr29:5892487-5892772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
92-316
               

               
Cow position:
               
chr29:37785546-37785297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
97-351
               

               
Cow position:
               
chr29:2481687-2481421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
99-268
               

               
Cow position:
               
chr29:30028784-30028610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
99-392
               

               
Cow position:
               
chr29:6293817-6293510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
102-286
               

               
Cow position:
               
chr29:29121583-29121402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
102-332
               

               
Cow position:
               
chr29:40903069-40902827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 232
               

               
Conread position:
               
103-352
               

               
Cow position:
               
chr29:18338894-18338632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
105-274
               

               
Cow position:
               
chr29:26415754-26415927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
107-269
               

               
Cow position:
               
chr29:31899365-31899201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr29:40583452-40583650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
108-392
               

               
Cow position:
               
chr29:9686353-9686038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 234
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr29:36356513-36356741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
114-263
               

               
Cow position:
               
chr29:41347213-41347363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
114-300
               

               
Cow position:
               
chr29:36037374-36037556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
114-340
               

               
Cow position:
               
chr29:9709361-9709599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 211
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr29:10058863-10058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
125-338
               

               
Cow position:
               
chr29:26559844-26559625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
125-391
               

               
Cow position:
               
chr29:7408217-7407925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 275
               

               
Conread position:
               
126-414
               

               
Cow position:
               
chr29:20178456-20178149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 237
               

               
Conread position:
               
132-392
               

               
Cow position:
               
chr29:13372346-13372629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr29:32521543-32521841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 274
               

               
Conread position:
               
135-332
               

               
Cow position:
               
chr29:4328117-4328317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
137-388
               

               
Cow position:
               
chr29:8164177-8163898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 264
               

               
Conread position:
               
141-316
               

               
Cow position:
               
chr29:10456863-10456681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr29:38760453-38760249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
149-390
               

               
Cow position:
               
chr29:26734731-26734989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 183
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr29:45589882-45589620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr29:40960212-40960052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
158-340
               

               
Cow position:
               
chr29:43252980-43252782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr29:6844919-6844665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
167-398
               

               
Cow position:
               
chr29:699893-699648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr29:3502776-3502975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
170-400
               

               
Cow position:
               
chr29:18878782-18878527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 232
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr29:3395833-3396070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
182-391
               

               
Cow position:
               
chr29:9139139-9139376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 222
               

               
Conread position:
               
182-414
               

               
Cow position:
               
chr29:2984618-2984876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 218
               

               
Conread position:
               
183-387
               

               
Cow position:
               
chr29:109444-109656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
183-392
               

               
Cow position:
               
chr29:27668908-27668698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
183-409
               

               
Cow position:
               
chr29:16195586-16195822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
187-312
               

               
Cow position:
               
chr29:38731362-38731491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
189-390
               

               
Cow position:
               
chr29:41530589-41530809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 203
               

               
Conread position:
               
190-392
               

               
Cow position:
               
chr29:94805-94590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
190-392
               

               
Cow position:
               
chr29:37599464-37599245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
196-365
               

               
Cow position:
               
chr29:21265481-21265661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
196-391
               

               
Cow position:
               
chr29:12784209-12783993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 201
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr29:356072-356283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr29:22175439-22175651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr29:26329964-26330191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr29:29769600-29769366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr29:585029-585239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 180
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr29:22069000-22068782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 202
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr29:1395356-1395558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr29:707190-706964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
213-392
               

               
Cow position:
               
chr29:4520099-4520299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
213-410
               

               
Cow position:
               
chr29:16309515-16309724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
402-514
               

               
Cow position:
               
chr29:17436766-17436877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
404-514
               

               
Cow position:
               
chr29:5520468-5520353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
405-511
               

               
Cow position:
               
chr29:19420595-19420485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
405-511
               

               
Cow position:
               
chr29:35084204-35084096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 89
               
Show alignments to all cow chromosomes.