Cow genome map

Conread name: reru03c_c10.y1

Conread position: 1-252
Cow position: chr6:55762980-55763233 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-267
Cow position: chr6:27240373-27240120 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 148, 91

Conread position: 1-269
Cow position: chr6:42420858-42421124 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 68

Conread position: 1-272
Cow position: chr6:20245674-20245950 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-281
Cow position: chr6:39137231-39137509 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 148, 35

Conread position: 1-284
Cow position: chr6:60516320-60516608 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 62

Conread position: 1-288
Cow position: chr6:23889072-23888778 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 11

Conread position: 1-288
Cow position: chr6:33509172-33509463 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 74

Conread position: 1-288
Cow position: chr6:44906068-44906373 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 202

Conread position: 1-288
Cow position: chr6:61443520-61443221 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 62, 180

Conread position: 1-288
Cow position: chr6:65016299-65016004 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 91

Conread position: 1-288
Cow position: chr6:66363655-66363362 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 1-292
Cow position: chr6:42518561-42518861 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 11

Conread position: 1-292
Cow position: chr6:60673140-60673433 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 1-294
Cow position: chr6:6596177-6596472 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 144

Conread position: 1-294
Cow position: chr6:8599378-8599681 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 1-294
Cow position: chr6:32287210-32287505 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 1-295
Cow position: chr6:24030965-24031266 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 273

Conread position: 1-300
Cow position: chr6:66304248-66303949 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 49

Conread position: 1-307
Cow position: chr6:51877495-51877811 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 84

Conread position: 1-310
Cow position: chr6:6471180-6470872 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 1-316
Cow position: chr6:643003-642654 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 1-316
Cow position: chr6:19328251-19327940 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 148

Conread position: 1-320
Cow position: chr6:46570716-46571041 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 91

Conread position: 1-325
Cow position: chr6:13741288-13741623 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 164

Conread position: 1-330
Cow position: chr6:9733241-9732911 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 143

Conread position: 1-332
Cow position: chr6:18447923-18447576 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 337

Conread position: 1-332
Cow position: chr6:28180373-28180035 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 68, 15

Conread position: 1-332
Cow position: chr6:28559028-28559358 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 148, 11

Conread position: 1-332
Cow position: chr6:47540115-47540466 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 1-332
Cow position: chr6:53178229-53178573 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-332
Cow position: chr6:60017663-60018000 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 1-332
Cow position: chr6:62925410-62925063 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 115

Conread position: 1-334
Cow position: chr6:16765802-16765460 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 284

Conread position: 1-334
Cow position: chr6:65870616-65870966 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 66

Conread position: 1-334
Cow position: chr6:67544702-67544360 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-335
Cow position: chr6:18049435-18049094 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 327

Conread position: 1-336
Cow position: chr6:1174911-1174559 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-341
Cow position: chr6:27852117-27851761 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 305

Conread position: 1-345
Cow position: chr6:50527243-50527596 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 218

Conread position: 1-347
Cow position: chr6:54357791-54357433 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 59

Conread position: 1-348
Cow position: chr6:49626945-49627305 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 1-349
Cow position: chr6:2607204-2607568 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 172

Conread position: 1-350
Cow position: chr6:65862276-65862647 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-351
Cow position: chr6:1784175-1783817 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 160

Conread position: 1-351
Cow position: chr6:3979071-3978702 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 191

Conread position: 1-351
Cow position: chr6:12623061-12623430 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-351
Cow position: chr6:32211035-32210668 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 26

Conread position: 1-351
Cow position: chr6:60781869-60781491 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 256
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 86

Conread position: 1-351
Cow position: chr6:67214335-67214705 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 21

Conread position: 1-374
Cow position: chr6:1770604-1770210 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 1-374
Cow position: chr6:11638149-11637766 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 22

Conread position: 1-384
Cow position: chr6:48567755-48567350 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 397

Conread position: 1-386
Cow position: chr6:28476757-28477177 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 345

Conread position: 1-389
Cow position: chr6:47339773-47339356 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 404

Conread position: 1-389
Cow position: chr6:65711417-65711827 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 1-390
Cow position: chr6:12629608-12630028 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 151, 41

Conread position: 1-390
Cow position: chr6:18987812-18988219 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 1-390
Cow position: chr6:61575182-61575612 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 284

Conread position: 1-391
Cow position: chr6:16675407-16675805 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 170

Conread position: 1-391
Cow position: chr6:32121486-32121909 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 289

Conread position: 1-391
Cow position: chr6:44372358-44371942 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 152

Conread position: 1-392
Cow position: chr6:5095960-5095542 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 75

Conread position: 1-392
Cow position: chr6:10332518-10332086 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 415

Conread position: 1-392
Cow position: chr6:10695450-10695872 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 106

Conread position: 1-392
Cow position: chr6:16737612-16738025 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 12

Conread position: 1-392
Cow position: chr6:32125657-32126068 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 394

Conread position: 1-392
Cow position: chr6:32916329-32915918 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 80

Conread position: 1-392
Cow position: chr6:34075616-34076032 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 176

Conread position: 1-392
Cow position: chr6:35181656-35181255 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 86

Conread position: 1-392
Cow position: chr6:36470977-36470561 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 196

Conread position: 1-392
Cow position: chr6:40031784-40032194 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 17

Conread position: 1-392
Cow position: chr6:42565277-42565694 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 1-392
Cow position: chr6:58073627-58074052 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 409

Conread position: 1-393
Cow position: chr6:35613820-35613418 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 29, 88

Conread position: 1-396
Cow position: chr6:24327551-24327132 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 276

Conread position: 1-398
Cow position: chr6:32867616-32867203 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 346

Conread position: 1-404
Cow position: chr6:9751459-9751038 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 17

Conread position: 1-407
Cow position: chr6:16699861-16700285 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 84

Conread position: 1-410
Cow position: chr6:24781979-24781532 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 414

Conread position: 1-414
Cow position: chr6:4864945-4864520 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 24

Conread position: 1-414
Cow position: chr6:5302808-5302392 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 59

Conread position: 1-414
Cow position: chr6:10612447-10612881 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 163

Conread position: 1-414
Cow position: chr6:38233583-38233986 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 11

Conread position: 1-414
Cow position: chr6:38770895-38771312 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 98

Conread position: 1-415
Cow position: chr6:14839435-14838997 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 69

Conread position: 1-415
Cow position: chr6:44098678-44099115 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 177

Conread position: 1-415
Cow position: chr6:58075812-58076258 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 181

Conread position: 1-415
Cow position: chr6:64431537-64431965 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 91

Conread position: 1-429
Cow position: chr6:67187286-67187725 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 162

Conread position: 1-481
Cow position: chr6:4681340-4681849 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 333
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 217

Conread position: 1-515
Cow position: chr6:10605274-10605815 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 403

Conread position: 2-288
Cow position: chr6:28811410-28811110 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 2-293
Cow position: chr6:17414862-17414561 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 2-305
Cow position: chr6:47773632-47773313 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 69, 204

Conread position: 2-312
Cow position: chr6:23695589-23695909 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-314
Cow position: chr6:8636867-8637192 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 73

Conread position: 2-316
Cow position: chr6:56842751-56843075 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 272

Conread position: 2-332
Cow position: chr6:46465419-46465757 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 330

Conread position: 2-335
Cow position: chr6:21312164-21311813 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 2-343
Cow position: chr6:64426779-64427136 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 190

Conread position: 2-348
Cow position: chr6:50120194-50119833 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 2-392
Cow position: chr6:606854-607265 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 58

Conread position: 2-392
Cow position: chr6:17090177-17090605 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 304
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 161

Conread position: 2-398
Cow position: chr6:51834994-51835409 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 90

Conread position: 2-401
Cow position: chr6:41824237-41823807 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 405

Conread position: 3-262
Cow position: chr6:33451563-33451822 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 94

Conread position: 3-267
Cow position: chr6:62015238-62015506 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 94

Conread position: 3-288
Cow position: chr6:18961928-18961640 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 146

Conread position: 3-295
Cow position: chr6:36928243-36928542 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 179

Conread position: 3-306
Cow position: chr6:16618762-16619065 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 146, 43

Conread position: 3-312
Cow position: chr6:29210092-29210412 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 208

Conread position: 3-323
Cow position: chr6:56501904-56502231 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 130

Conread position: 3-332
Cow position: chr6:2012615-2012953 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 34

Conread position: 3-334
Cow position: chr6:54647933-54647585 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 3-344
Cow position: chr6:22877558-22877211 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 27

Conread position: 3-368
Cow position: chr6:31688794-31688415 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 71, 162

Conread position: 3-392
Cow position: chr6:51674504-51674917 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 26

Conread position: 3-398
Cow position: chr6:5958423-5958015 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 3-399
Cow position: chr6:28147848-28148264 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 109

Conread position: 3-414
Cow position: chr6:7801771-7801365 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 101

Conread position: 4-295
Cow position: chr6:52216162-52215861 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 4-295
Cow position: chr6:52235653-52235352 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 5-332
Cow position: chr6:49399023-49398680 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 333

Conread position: 5-391
Cow position: chr6:8209987-8209597 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 34

Conread position: 7-258
Cow position: chr6:62979652-62979394 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 189

Conread position: 7-316
Cow position: chr6:37331558-37331880 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 65, 165

Conread position: 8-294
Cow position: chr6:13688220-13687920 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 73, 123

Conread position: 8-315
Cow position: chr6:49411082-49410773 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 144, 130

Conread position: 12-312
Cow position: chr6:2405176-2404864 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 141

Conread position: 12-364
Cow position: chr6:29077327-29077697 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 53, 164

Conread position: 12-392
Cow position: chr6:24652579-24652188 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 178

Conread position: 13-285
Cow position: chr6:21004256-21004535 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 197

Conread position: 13-315
Cow position: chr6:1866283-1866590 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 169

Conread position: 13-316
Cow position: chr6:37634393-37634703 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 79

Conread position: 13-414
Cow position: chr6:16410800-16411218 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 67

Conread position: 14-271
Cow position: chr6:27815876-27815631 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 12

Conread position: 14-351
Cow position: chr6:11192847-11192507 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 67

Conread position: 14-392
Cow position: chr6:6343026-6343433 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 14-392
Cow position: chr6:56849599-56850017 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 281

Conread position: 15-390
Cow position: chr6:33302015-33302415 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 385

Conread position: 17-350
Cow position: chr6:9008993-9008652 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 22

Conread position: 18-288
Cow position: chr6:32854652-32854384 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 25

Conread position: 20-391
Cow position: chr6:59597266-59597648 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 252

Conread position: 22-390
Cow position: chr6:6060946-6060566 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 253

Conread position: 23-350
Cow position: chr6:6944067-6943727 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 88

Conread position: 24-354
Cow position: chr6:6642972-6642637 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 59

Conread position: 26-350
Cow position: chr6:39358720-39358385 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 78

Conread position: 31-294
Cow position: chr6:9375750-9375482 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 39

Conread position: 31-414
Cow position: chr6:14958722-14958315 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 86

Conread position: 33-332
Cow position: chr6:16706632-16706937 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 145

Conread position: 36-392
Cow position: chr6:66431464-66431827 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 228

Conread position: 36-420
Cow position: chr6:8804918-8804497 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 254

Conread position: 37-414
Cow position: chr6:52248496-52248105 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 143, 59

Conread position: 39-340
Cow position: chr6:55608184-55607867 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 273

Conread position: 39-423
Cow position: chr6:1944358-1944746 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 186

Conread position: 40-310
Cow position: chr6:16492277-16492017 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 56

Conread position: 40-316
Cow position: chr6:16397553-16397267 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 50-361
Cow position: chr6:24902497-24902170 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 39

Conread position: 51-354
Cow position: chr6:10106360-10106028 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 98, 293

Conread position: 52-388
Cow position: chr6:2546885-2547246 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 50

Conread position: 52-414
Cow position: chr6:54140465-54140823 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 54-389
Cow position: chr6:12927766-12928121 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 107

Conread position: 55-350
Cow position: chr6:61268979-61269269 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 118

Conread position: 60-332
Cow position: chr6:35842310-35842589 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 155

Conread position: 61-288
Cow position: chr6:26728879-26728644 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 61-392
Cow position: chr6:20231170-20230823 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 62-290
Cow position: chr6:41961314-41961084 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 152

Conread position: 62-324
Cow position: chr6:55474901-55475174 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 149

Conread position: 63-325
Cow position: chr6:48468454-48468734 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 63-326
Cow position: chr6:54806875-54807156 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 63-332
Cow position: chr6:15305241-15305515 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 113

Conread position: 63-340
Cow position: chr6:12844962-12845257 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 213

Conread position: 63-391
Cow position: chr6:35990574-35990231 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 25

Conread position: 63-428
Cow position: chr6:63047229-63047621 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 72

Conread position: 64-284
Cow position: chr6:24649508-24649728 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 19

Conread position: 65-414
Cow position: chr6:456835-457206 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 80, 57

Conread position: 70-346
Cow position: chr6:57474039-57474326 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 120

Conread position: 70-398
Cow position: chr6:66532143-66531810 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 79, 159

Conread position: 71-332
Cow position: chr6:36195874-36196148 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 264

Conread position: 71-391
Cow position: chr6:54867179-54867518 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 78, 41

Conread position: 71-414
Cow position: chr6:28148502-28148862 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 142

Conread position: 76-290
Cow position: chr6:5672895-5673113 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 73, 65

Conread position: 77-321
Cow position: chr6:28482680-28482934 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 231

Conread position: 77-393
Cow position: chr6:44078183-44078523 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 78-344
Cow position: chr6:12934473-12934190 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 84

Conread position: 79-290
Cow position: chr6:26837716-26837505 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 111, 97

Conread position: 79-351
Cow position: chr6:42693031-42693307 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 247

Conread position: 79-392
Cow position: chr6:10176630-10176291 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 92

Conread position: 83-316
Cow position: chr6:67044644-67044876 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 6

Conread position: 84-348
Cow position: chr6:3936220-3936495 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 89

Conread position: 85-464
Cow position: chr6:50446085-50445681 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 105

Conread position: 86-340
Cow position: chr6:19681841-19681577 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 102

Conread position: 87-335
Cow position: chr6:12116374-12116109 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 76, 27

Conread position: 94-284
Cow position: chr6:60859620-60859428 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 82

Conread position: 97-295
Cow position: chr6:6117870-6117656 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 97-392
Cow position: chr6:12337671-12337994 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 97-392
Cow position: chr6:12500543-12500863 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 52, 295

Conread position: 100-397
Cow position: chr6:46557747-46558063 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 49, 107

Conread position: 101-421
Cow position: chr6:21587731-21587383 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 50, 303

Conread position: 102-414
Cow position: chr6:38218357-38218695 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 9

Conread position: 104-332
Cow position: chr6:5329848-5330085 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 41, 107

Conread position: 104-392
Cow position: chr6:611261-611554 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 8

Conread position: 105-288
Cow position: chr6:60467722-60467906 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 167

Conread position: 106-294
Cow position: chr6:58315742-58315938 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 108-398
Cow position: chr6:31525749-31526053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 75

Conread position: 113-392
Cow position: chr6:63272915-63272607 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 292

Conread position: 114-288
Cow position: chr6:58172891-58173068 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 62

Conread position: 114-340
Cow position: chr6:19508728-19508495 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 79

Conread position: 114-400
Cow position: chr6:53401074-53401366 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 117-388
Cow position: chr6:40264487-40264199 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 25

Conread position: 119-334
Cow position: chr6:47519759-47519986 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 104

Conread position: 121-359
Cow position: chr6:62479455-62479199 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 122-292
Cow position: chr6:26696896-26696722 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 151

Conread position: 122-349
Cow position: chr6:7131160-7130926 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 154

Conread position: 123-414
Cow position: chr6:54369184-54368877 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 53

Conread position: 124-332
Cow position: chr6:6201161-6201375 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 52

Conread position: 125-294
Cow position: chr6:69500044-69500216 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 136

Conread position: 125-392
Cow position: chr6:57164141-57164433 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 275

Conread position: 132-341
Cow position: chr6:32024616-32024392 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 132-343
Cow position: chr6:51387487-51387711 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 52

Conread position: 132-358
Cow position: chr6:21534780-21535019 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 142

Conread position: 134-295
Cow position: chr6:3591849-3592012 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 42

Conread position: 134-318
Cow position: chr6:60274500-60274315 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 155

Conread position: 134-341
Cow position: chr6:34235711-34235488 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 136-330
Cow position: chr6:42961642-42961428 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 136-398
Cow position: chr6:60473859-60474139 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 13, 244

Conread position: 138-344
Cow position: chr6:47150506-47150726 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 207

Conread position: 138-398
Cow position: chr6:54365596-54365319 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 255

Conread position: 139-398
Cow position: chr6:48281723-48282002 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 139-505
Cow position: chr6:16352590-16352190 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 94

Conread position: 142-415
Cow position: chr6:53710849-53711143 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 9

Conread position: 148-338
Cow position: chr6:35769744-35769540 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 148-392
Cow position: chr6:40713760-40713495 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 11

Conread position: 148-392
Cow position: chr6:54293849-54294113 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 248

Conread position: 148-443
Cow position: chr6:61515459-61515133 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 257

Conread position: 156-341
Cow position: chr6:17068074-17067872 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 158-325
Cow position: chr6:11829914-11830101 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 161-389
Cow position: chr6:65676008-65676256 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 235

Conread position: 164-294
Cow position: chr6:54132573-54132705 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 11

Conread position: 169-340
Cow position: chr6:40138946-40138771 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 126

Conread position: 169-360
Cow position: chr6:61113509-61113722 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 173-295
Cow position: chr6:62967124-62966998 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 101

Conread position: 173-392
Cow position: chr6:54600131-54600351 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 113

Conread position: 177-332
Cow position: chr6:54885146-54884976 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 178-404
Cow position: chr6:6063507-6063273 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 9

Conread position: 181-391
Cow position: chr6:130393-130159 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 156

Conread position: 182-351
Cow position: chr6:21110742-21110925 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 127

Conread position: 182-392
Cow position: chr6:67950733-67950957 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 7

Conread position: 183-332
Cow position: chr6:66433723-66433880 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 7

Conread position: 183-334
Cow position: chr6:10635952-10636107 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 7

Conread position: 183-388
Cow position: chr6:68049211-68049433 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 6

Conread position: 183-391
Cow position: chr6:28977256-28977040 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 7

Conread position: 183-392
Cow position: chr6:15301042-15300821 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 7

Conread position: 183-392
Cow position: chr6:31564558-31564334 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 9

Conread position: 183-392
Cow position: chr6:37148970-37149193 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 6

Conread position: 183-392
Cow position: chr6:38440957-38441181 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 7

Conread position: 183-398
Cow position: chr6:52025876-52025641 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 7

Conread position: 183-410
Cow position: chr6:14949706-14949458 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 7

Conread position: 183-410
Cow position: chr6:49685358-49685608 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 215

Conread position: 183-414
Cow position: chr6:67304577-67304832 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 7

Conread position: 184-389
Cow position: chr6:54864891-54864668 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 87

Conread position: 189-334
Cow position: chr6:4383273-4383422 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 83

Conread position: 189-414
Cow position: chr6:49002944-49002705 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 189-415
Cow position: chr6:38207715-38207461 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 213

Conread position: 190-391
Cow position: chr6:38614605-38614820 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 134

Conread position: 190-392
Cow position: chr6:14850930-14850709 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 190-392
Cow position: chr6:45160510-45160289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 205

Conread position: 190-428
Cow position: chr6:5462267-5462018 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 81

Conread position: 191-391
Cow position: chr6:242596-242814 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 28, 82

Conread position: 196-340
Cow position: chr6:53460784-53460627 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 196-350
Cow position: chr6:59015775-59015599 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 196-392
Cow position: chr6:66874149-66874355 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 76

Conread position: 196-399
Cow position: chr6:65702614-65702390 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 182

Conread position: 197-392
Cow position: chr6:17997527-17997311 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 184

Conread position: 205-388
Cow position: chr6:6098486-6098282 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 9, 126

Conread position: 205-392
Cow position: chr6:38641294-38641499 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 189

Conread position: 206-392
Cow position: chr6:66131105-66131312 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 67

Conread position: 213-414
Cow position: chr6:10400089-10399878 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 80

Conread position: 226-397
Cow position: chr6:37467719-37467534 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 165

Conread position: 226-444
Cow position: chr6:53519803-53519563 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 182

Conread position: 231-400
Cow position: chr6:8125157-8125337 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 42

Conread position: 233-392
Cow position: chr6:65264708-65264533 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 37

Conread position: 401-506
Cow position: chr6:26408449-26408340 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 401-514
Cow position: chr6:54820887-54821004 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 402-511
Cow position: chr6:13367342-13367455 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 402-511
Cow position: chr6:15937798-15937685 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 402-511
Cow position: chr6:43134882-43134769 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 402-512
Cow position: chr6:2153542-2153428 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 402-512
Cow position: chr6:23610999-23611108 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 402-515
Cow position: chr6:57299815-57299932 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 403-512
Cow position: chr6:44544091-44543979 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 96

Show alignments to all cow chromosomes.