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Cow genome map

           
Conread name:
           
reru07c_g8.y1
        

               
Conread position:
               
199-421
               

               
Cow position:
               
chr9:52828492-52828727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr9:38289473-38289236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
212-569
               

               
Cow position:
               
chr9:5441832-5442214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
213-541
               

               
Cow position:
               
chr9:9516926-9516572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr9:23797087-23797318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
217-450
               

               
Cow position:
               
chr9:1894191-1893949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
217-526
               

               
Cow position:
               
chr9:50607104-50606765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
218-569
               

               
Cow position:
               
chr9:6879628-6879988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
223-450
               

               
Cow position:
               
chr9:41486382-41486144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
233-569
               

               
Cow position:
               
chr9:17799502-17799848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
246-545
               

               
Cow position:
               
chr9:60027084-60027400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
251-569
               

               
Cow position:
               
chr9:49709750-49710062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
206, 47
               

               
Conread position:
               
259-429
               

               
Cow position:
               
chr9:56204715-56204884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr9:49416898-49417177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
267-569
               

               
Cow position:
               
chr9:4268063-4267762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
267-569
               

               
Cow position:
               
chr9:18342652-18342941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
268-569
               

               
Cow position:
               
chr9:10144555-10144254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
275-447
               

               
Cow position:
               
chr9:52267829-52267663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
275-535
               

               
Cow position:
               
chr9:48627942-48628220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
278-529
               

               
Cow position:
               
chr9:24872763-24873015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
279-405
               

               
Cow position:
               
chr9:55354539-55354664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
279-433
               

               
Cow position:
               
chr9:41785130-41785291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
279-450
               

               
Cow position:
               
chr9:9459913-9460072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
279-487
               

               
Cow position:
               
chr9:6596312-6596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
279-500
               

               
Cow position:
               
chr9:5077787-5077563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
279-506
               

               
Cow position:
               
chr9:63896469-63896700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
279-525
               

               
Cow position:
               
chr9:13205648-13205385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
279-529
               

               
Cow position:
               
chr9:3387625-3387878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
164, 31
               

               
Conread position:
               
279-529
               

               
Cow position:
               
chr9:10010733-10010991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
279-529
               

               
Cow position:
               
chr9:34689667-34689416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
279-529
               

               
Cow position:
               
chr9:56065482-56065735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
279-530
               

               
Cow position:
               
chr9:6952019-6952278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr9:1532404-1532146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr9:9199861-9199594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr9:10118735-10118475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
279-534
               

               
Cow position:
               
chr9:36490971-36490700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr9:5509655-5509913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr9:6685828-6686063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr9:7634199-7634465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr9:8562740-8563030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr9:12910473-12910206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
279-541
               

               
Cow position:
               
chr9:9461736-9461457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
279-541
               

               
Cow position:
               
chr9:26279251-26278979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
279-544
               

               
Cow position:
               
chr9:20090974-20091243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
279-563
               

               
Cow position:
               
chr9:20847853-20848148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
279-567
               

               
Cow position:
               
chr9:58134085-58133806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
279-568
               

               
Cow position:
               
chr9:32676602-32676903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr9:13670561-13670854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr9:20416576-20416291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr9:58452147-58451879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr9:58979328-58979619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
280-509
               

               
Cow position:
               
chr9:5263419-5263667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
284-415
               

               
Cow position:
               
chr9:52518892-52518759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
284-450
               

               
Cow position:
               
chr9:29195088-29194926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
284-523
               

               
Cow position:
               
chr9:5500786-5501038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
284-535
               

               
Cow position:
               
chr9:52578604-52578344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
284-569
               

               
Cow position:
               
chr9:9596016-9595736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
285-528
               

               
Cow position:
               
chr9:33219015-33218766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
285-537
               

               
Cow position:
               
chr9:46316847-46316591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
285-567
               

               
Cow position:
               
chr9:33119954-33119666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
289-501
               

               
Cow position:
               
chr9:26345033-26344810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
293-529
               

               
Cow position:
               
chr9:7362970-7363212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
293-532
               

               
Cow position:
               
chr9:26403727-26403975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
295-434
               

               
Cow position:
               
chr9:30780062-30780195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
295-441
               

               
Cow position:
               
chr9:34024643-34024789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-447
               

               
Cow position:
               
chr9:23956036-23955890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-450
               

               
Cow position:
               
chr9:44770248-44770101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
295-500
               

               
Cow position:
               
chr9:22318295-22318504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
295-524
               

               
Cow position:
               
chr9:8901283-8901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
295-525
               

               
Cow position:
               
chr9:62656747-62656979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
295-527
               

               
Cow position:
               
chr9:8998293-8998541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
295-528
               

               
Cow position:
               
chr9:64105843-64106093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
295-529
               

               
Cow position:
               
chr9:55256608-55256364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-529
               

               
Cow position:
               
chr9:62908075-62907857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
295-532
               

               
Cow position:
               
chr9:33940549-33940797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
295-532
               

               
Cow position:
               
chr9:35167120-35167362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
295-533
               

               
Cow position:
               
chr9:32371807-32371570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
295-535
               

               
Cow position:
               
chr9:9552034-9552280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
295-535
               

               
Cow position:
               
chr9:19067728-19067970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
295-535
               

               
Cow position:
               
chr9:61302944-61303196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-536
               

               
Cow position:
               
chr9:23431203-23430952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-536
               

               
Cow position:
               
chr9:28747576-28747331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-549
               

               
Cow position:
               
chr9:29185193-29184923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
295-555
               

               
Cow position:
               
chr9:34286743-34287014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
295-569
               

               
Cow position:
               
chr9:31079136-31078864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
295-569
               

               
Cow position:
               
chr9:44467395-44467131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
295-569
               

               
Cow position:
               
chr9:45756307-45756578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
296-528
               

               
Cow position:
               
chr9:20579649-20579420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
297-441
               

               
Cow position:
               
chr9:24652350-24652499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
300-531
               

               
Cow position:
               
chr9:57897160-57896932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
301-547
               

               
Cow position:
               
chr9:5319573-5319833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
306-404
               

               
Cow position:
               
chr9:16137386-16137289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-412
               

               
Cow position:
               
chr9:39758474-39758579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-413
               

               
Cow position:
               
chr9:36628074-36628180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-434
               

               
Cow position:
               
chr9:63361763-63361635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
306-445
               

               
Cow position:
               
chr9:37199083-37199215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-445
               

               
Cow position:
               
chr9:53751001-53750863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
306-449
               

               
Cow position:
               
chr9:9686456-9686319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
306-449
               

               
Cow position:
               
chr9:33584729-33584587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:17310606-17310466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:21080519-21080659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:28754773-28754916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:32982119-32981975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:41282971-41283110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
306-450
               

               
Cow position:
               
chr9:53109207-53109349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
306-460
               

               
Cow position:
               
chr9:54615344-54615195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
306-489
               

               
Cow position:
               
chr9:8628961-8628776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
306-489
               

               
Cow position:
               
chr9:26310462-26310649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
306-489
               

               
Cow position:
               
chr9:34283909-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
306-497
               

               
Cow position:
               
chr9:43757493-43757692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
306-501
               

               
Cow position:
               
chr9:39011513-39011318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
306-504
               

               
Cow position:
               
chr9:3378710-3378906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
306-505
               

               
Cow position:
               
chr9:22114679-22114472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
306-516
               

               
Cow position:
               
chr9:25556928-25557139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
306-518
               

               
Cow position:
               
chr9:54493091-54493299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
306-520
               

               
Cow position:
               
chr9:50543472-50543246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
306-521
               

               
Cow position:
               
chr9:49293187-49292970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
306-523
               

               
Cow position:
               
chr9:5245809-5246036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
306-524
               

               
Cow position:
               
chr9:9654351-9654130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
306-524
               

               
Cow position:
               
chr9:21460195-21459976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
306-525
               

               
Cow position:
               
chr9:55321593-55321820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
306-526
               

               
Cow position:
               
chr9:11168686-11168914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
306-526
               

               
Cow position:
               
chr9:53258098-53257873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr9:9403223-9402989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr9:43870931-43871166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr9:59386813-59386586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:1751294-1751524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 43
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:8723750-8723982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:16300613-16300376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:18380821-18381049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:21888126-21888359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:24887162-24887388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:28354473-28354708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:30123885-30124110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
138, 40
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:33597942-33598171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:33823074-33823288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:37069603-37069379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:41679703-41679935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:55287933-55287708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:56032359-56032139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 44
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr9:59013383-59013144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:767195-766960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:3738268-3738029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:4341203-4340977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:11299724-11299498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:23388716-23388485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:34374968-34374739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr9:51620401-51620629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
306-539
               

               
Cow position:
               
chr9:13169707-13169468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
306-539
               

               
Cow position:
               
chr9:42446027-42445785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
306-540
               

               
Cow position:
               
chr9:34468622-34468387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr9:1729718-1729478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr9:9625054-9624832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr9:45141644-45141407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
306-543
               

               
Cow position:
               
chr9:41728216-41728456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:5327214-5327458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:28726768-28726519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:29006513-29006765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:30477819-30477580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:50139241-50139485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
306-544
               

               
Cow position:
               
chr9:62357572-62357327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
306-557
               

               
Cow position:
               
chr9:19493510-19493253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
306-567
               

               
Cow position:
               
chr9:43443761-43444011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:5219216-5218961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:5763675-5763412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:6192504-6192241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:8534734-8534465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
137, 37
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:17740985-17740726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:18217143-18216882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 37
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:44832096-44831837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:51204683-51204943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:56453294-56453550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:56773032-56773301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:61997647-61997377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
306-569
               

               
Cow position:
               
chr9:64091636-64091906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
307-514
               

               
Cow position:
               
chr9:60395091-60394879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
307-524
               

               
Cow position:
               
chr9:43875762-43875540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
307-529
               

               
Cow position:
               
chr9:9406096-9405864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
307-529
               

               
Cow position:
               
chr9:44915140-44914904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
307-532
               

               
Cow position:
               
chr9:19555333-19555564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
139, 23
               

               
Conread position:
               
307-566
               

               
Cow position:
               
chr9:38792972-38793233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
307-569
               

               
Cow position:
               
chr9:5227215-5226946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
308-515
               

               
Cow position:
               
chr9:19903040-19903238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
308-532
               

               
Cow position:
               
chr9:8636625-8636842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
308-532
               

               
Cow position:
               
chr9:17872152-17871917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
308-569
               

               
Cow position:
               
chr9:11319676-11319414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
308-569
               

               
Cow position:
               
chr9:34958098-34957833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
308-569
               

               
Cow position:
               
chr9:53762652-53762919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
309-447
               

               
Cow position:
               
chr9:17840719-17840581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
309-492
               

               
Cow position:
               
chr9:7952860-7953049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
309-532
               

               
Cow position:
               
chr9:36445579-36445813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
309-532
               

               
Cow position:
               
chr9:41789243-41789473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
310-528
               

               
Cow position:
               
chr9:8317488-8317280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
310-532
               

               
Cow position:
               
chr9:4861344-4861578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
310-535
               

               
Cow position:
               
chr9:45285575-45285338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
310-544
               

               
Cow position:
               
chr9:8288578-8288821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
313-544
               

               
Cow position:
               
chr9:35849867-35850103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr9:58670706-58670886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
314-544
               

               
Cow position:
               
chr9:1938094-1938330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
315-544
               

               
Cow position:
               
chr9:22638067-22638304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
320-569
               

               
Cow position:
               
chr9:38343860-38344112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
321-549
               

               
Cow position:
               
chr9:36827106-36827335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
322-525
               

               
Cow position:
               
chr9:6225482-6225269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
322-532
               

               
Cow position:
               
chr9:9416423-9416213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
324-523
               

               
Cow position:
               
chr9:44921419-44921210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
326-532
               

               
Cow position:
               
chr9:1952294-1952079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
326-544
               

               
Cow position:
               
chr9:3410758-3410973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
329-569
               

               
Cow position:
               
chr9:22360989-22361233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
340-569
               

               
Cow position:
               
chr9:20811080-20810843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
351-567
               

               
Cow position:
               
chr9:30195214-30195429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
357-525
               

               
Cow position:
               
chr9:18419197-18419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
360-528
               

               
Cow position:
               
chr9:1712467-1712292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
361-544
               

               
Cow position:
               
chr9:28773131-28773321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
365-529
               

               
Cow position:
               
chr9:59507103-59507274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
368-569
               

               
Cow position:
               
chr9:5238413-5238614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 170
               

               
Conread position:
               
379-537
               

               
Cow position:
               
chr9:34666448-34666613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
379-568
               

               
Cow position:
               
chr9:41652814-41653006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
381-529
               

               
Cow position:
               
chr9:60037680-60037840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
389-535
               

               
Cow position:
               
chr9:49403797-49403946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 28
               
Show alignments to all cow chromosomes.