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Cow genome map

           
Conread name:
           
reru19c_i21.y1
        

               
Conread position:
               
1-324
               

               
Cow position:
               
chr28:9426110-9426432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr28:16177493-16177314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr28:6091597-6091292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr28:16879807-16879567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr28:30302958-30303267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr28:4307650-4307982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr28:26220499-26220175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr28:8304480-8304225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr28:17012055-17012362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr28:11828716-11829022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr28:20174074-20173803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr28:7350889-7350577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr28:31841114-31841387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr28:21207141-21207368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr28:11584972-11585285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr28:25700634-25700953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
13-293
               

               
Cow position:
               
chr28:11059722-11059452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr28:6563660-6563906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr28:19038784-19039027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
16-320
               

               
Cow position:
               
chr28:16918946-16919242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr28:22332757-22332456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr28:5138771-5139077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr28:11079543-11079226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
18-202
               

               
Cow position:
               
chr28:2435796-2435991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
19-324
               

               
Cow position:
               
chr28:4881004-4881317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 249
               

               
Conread position:
               
20-225
               

               
Cow position:
               
chr28:20281982-20281776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
21-190
               

               
Cow position:
               
chr28:2737305-2737465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
21-324
               

               
Cow position:
               
chr28:3449536-3449221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
21-324
               

               
Cow position:
               
chr28:5931570-5931272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
252, 51
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr28:3725978-3726262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr28:11814857-11815127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
24-184
               

               
Cow position:
               
chr28:3257212-3257047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chr28:7750800-7750960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr28:5674096-5673872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
24-279
               

               
Cow position:
               
chr28:17948892-17949149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
24-304
               

               
Cow position:
               
chr28:3275706-3275429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr28:13269941-13269738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
25-324
               

               
Cow position:
               
chr28:10606413-10606708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
26-199
               

               
Cow position:
               
chr28:4866354-4866529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr28:26867931-26868114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
26-273
               

               
Cow position:
               
chr28:9705879-9705621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
26-321
               

               
Cow position:
               
chr28:11866447-11866743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
114, 54
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr28:3492568-3492864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr28:28765680-28765984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr28:11411312-11411538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr28:10763105-10762930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
28-321
               

               
Cow position:
               
chr28:5236370-5236681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
28-322
               

               
Cow position:
               
chr28:10863562-10863865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 194
               

               
Conread position:
               
28-324
               

               
Cow position:
               
chr28:1099459-1099740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
28-324
               

               
Cow position:
               
chr28:23410114-23410405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr28:11398570-11398823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
29-324
               

               
Cow position:
               
chr28:16085535-16085244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr28:8396554-8396326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr28:4643554-4643841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
30-321
               

               
Cow position:
               
chr28:5684915-5684633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
30-321
               

               
Cow position:
               
chr28:7618926-7619230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 261
               

               
Conread position:
               
32-206
               

               
Cow position:
               
chr28:8515972-8516146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr28:5630312-5630073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr28:21008453-21008695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr28:7697766-7698059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr28:18625449-18625149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
33-304
               

               
Cow position:
               
chr28:22500293-22500558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
33-321
               

               
Cow position:
               
chr28:16204111-16204406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
28, 247
               

               
Conread position:
               
33-324
               

               
Cow position:
               
chr28:26719542-26719270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
35-320
               

               
Cow position:
               
chr28:10588817-10589100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
36-275
               

               
Cow position:
               
chr28:5205479-5205239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
37-324
               

               
Cow position:
               
chr28:3143675-3143966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
38-272
               

               
Cow position:
               
chr28:19217021-19216792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
218, 34
               

               
Conread position:
               
39-324
               

               
Cow position:
               
chr28:11307298-11307588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
40-295
               

               
Cow position:
               
chr28:777883-777619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
41-245
               

               
Cow position:
               
chr28:17727906-17728101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chr28:10615740-10615954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
41-271
               

               
Cow position:
               
chr28:12598547-12598310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
41-317
               

               
Cow position:
               
chr28:4016731-4016459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
41-321
               

               
Cow position:
               
chr28:19564030-19564307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
41-321
               

               
Cow position:
               
chr28:24082477-24082185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr28:21845162-21844875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr28:8347945-8347651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr28:10053123-10053413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr28:13474505-13474220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
42-252
               

               
Cow position:
               
chr28:5805880-5805662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
44-269
               

               
Cow position:
               
chr28:7267746-7267968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
44-280
               

               
Cow position:
               
chr28:4186109-4185871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
46-228
               

               
Cow position:
               
chr28:8681223-8681414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr28:12430809-12430527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
48-254
               

               
Cow position:
               
chr28:15362777-15362568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr28:24646797-24646562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 182
               

               
Conread position:
               
48-315
               

               
Cow position:
               
chr28:20759491-20759775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
48-320
               

               
Cow position:
               
chr28:3741070-3740804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr28:25728397-25728119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 161
               

               
Conread position:
               
49-324
               

               
Cow position:
               
chr28:27161132-27161408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr28:11346290-11346562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr28:4282290-4282569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr28:34230430-34230151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
52-251
               

               
Cow position:
               
chr28:4364628-4364830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr28:7927370-7927094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
53-268
               

               
Cow position:
               
chr28:4938995-4938788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
55-324
               

               
Cow position:
               
chr28:26982544-26982817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr28:25249538-25249273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
59-206
               

               
Cow position:
               
chr28:24651414-24651569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr28:22362445-22362283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chr28:2819967-2819750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
59-278
               

               
Cow position:
               
chr28:30937481-30937703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
59-282
               

               
Cow position:
               
chr28:23793118-23793349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr28:11816482-11816708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
59-309
               

               
Cow position:
               
chr28:4823803-4823541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 212
               

               
Conread position:
               
59-323
               

               
Cow position:
               
chr28:34247841-34248102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 201
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr28:4809972-4809707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 217
               

               
Conread position:
               
61-254
               

               
Cow position:
               
chr28:9384100-9384298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
61-262
               

               
Cow position:
               
chr28:4101712-4101501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
61-263
               

               
Cow position:
               
chr28:555685-555484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr28:6059271-6059548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr28:5193523-5193240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr28:16369889-16370156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
62-279
               

               
Cow position:
               
chr28:11987351-11987139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
62-279
               

               
Cow position:
               
chr28:12055589-12055377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr28:4071146-4070889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr28:20124969-20124703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 248
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr28:23296507-23296244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 209
               

               
Conread position:
               
63-202
               

               
Cow position:
               
chr28:24726255-24726396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
63-265
               

               
Cow position:
               
chr28:10775526-10775735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
63-285
               

               
Cow position:
               
chr28:10964593-10964379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
63-296
               

               
Cow position:
               
chr28:9684150-9684386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
63-324
               

               
Cow position:
               
chr28:5204383-5204112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 246
               

               
Conread position:
               
67-324
               

               
Cow position:
               
chr28:8408911-8408654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr28:3160781-3161032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
68-323
               

               
Cow position:
               
chr28:11884349-11884599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
71-246
               

               
Cow position:
               
chr28:27429203-27429028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
72-218
               

               
Cow position:
               
chr28:22085369-22085517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
72-253
               

               
Cow position:
               
chr28:5711835-5712011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
72-283
               

               
Cow position:
               
chr28:2279426-2279631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 12
               

               
Conread position:
               
72-305
               

               
Cow position:
               
chr28:4138491-4138729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr28:3023740-3023987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr28:9636281-9636532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:4046020-4045772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:4182177-4181923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:12951592-12951349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:26743807-26743543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:33163300-33163544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr28:34430247-34430502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
73-261
               

               
Cow position:
               
chr28:5232113-5231920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr28:24672443-24672191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr28:662275-662028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr28:11426373-11426622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr28:24343528-24343290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
198, 17
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr28:26103872-26103628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
76-229
               

               
Cow position:
               
chr28:19395039-19394884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
76-257
               

               
Cow position:
               
chr28:29850650-29850829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
80-299
               

               
Cow position:
               
chr28:26531110-26531338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 6
               

               
Conread position:
               
81-244
               

               
Cow position:
               
chr28:4877259-4877432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr28:11743661-11743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
84-190
               

               
Cow position:
               
chr28:4588480-4588371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-193
               

               
Cow position:
               
chr28:24238319-24238427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
84-206
               

               
Cow position:
               
chr28:11305470-11305596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
84-211
               

               
Cow position:
               
chr28:26960748-26960877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
84-212
               

               
Cow position:
               
chr28:17943892-17943761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-221
               

               
Cow position:
               
chr28:3678524-3678384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-223
               

               
Cow position:
               
chr28:2151273-2151420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-235
               

               
Cow position:
               
chr28:10890577-10890727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-237
               

               
Cow position:
               
chr28:9109376-9109222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
84-242
               

               
Cow position:
               
chr28:24996454-24996612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
84-243
               

               
Cow position:
               
chr28:4876603-4876443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
84-247
               

               
Cow position:
               
chr28:30902286-30902122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
84-251
               

               
Cow position:
               
chr28:17680790-17680614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-254
               

               
Cow position:
               
chr28:3408057-3408229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
84-260
               

               
Cow position:
               
chr28:7131926-7132104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
84-262
               

               
Cow position:
               
chr28:11016569-11016389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
84-269
               

               
Cow position:
               
chr28:4006946-4006760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr28:17739990-17739797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr28:5255036-5254844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr28:12991300-12991105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
84-281
               

               
Cow position:
               
chr28:6975399-6975202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr28:5236039-5235836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr28:20397203-20397416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr28:7557565-7557776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 169
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr28:3445315-3445542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr28:16210936-16211163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr28:25057124-25056905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
84-309
               

               
Cow position:
               
chr28:133912-134137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
84-310
               

               
Cow position:
               
chr28:4013248-4013020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 194
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr28:22813413-22813188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
171, 49
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr28:3410824-3411066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 223
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr28:32358269-32358046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 146
               

               
Conread position:
               
84-319
               

               
Cow position:
               
chr28:9740622-9740391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr28:16346371-16346611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr28:24966551-24966307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr28:33884567-33884325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
84-322
               

               
Cow position:
               
chr28:7008816-7009055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
84-322
               

               
Cow position:
               
chr28:8140650-8140404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
84-322
               

               
Cow position:
               
chr28:11527094-11527337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
84-323
               

               
Cow position:
               
chr28:9285212-9285453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
84-323
               

               
Cow position:
               
chr28:30326936-30327170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:3011102-3011353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:3746362-3746125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:3914870-3914631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:4834678-4834922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:4884088-4884343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:5074356-5074590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
178, 22
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:11422650-11422896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:12933568-12933811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 190
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:17071505-17071253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 234
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:21868622-21868375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 229
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:29416560-29416795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr28:29988944-29989193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 199
               

               
Conread position:
               
85-236
               

               
Cow position:
               
chr28:2777694-2777537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
85-299
               

               
Cow position:
               
chr28:22371508-22371741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr28:4089895-4090128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr28:22346189-22345939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 228
               

               
Conread position:
               
86-212
               

               
Cow position:
               
chr28:8936311-8936181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
87-190
               

               
Cow position:
               
chr28:4100599-4100706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
87-238
               

               
Cow position:
               
chr28:10212266-10212422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr28:10978002-10977781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 194
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr28:25129046-25128803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr28:20313434-20313195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 216
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr28:23007583-23007814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
186, 33
               

               
Conread position:
               
91-321
               

               
Cow position:
               
chr28:14998222-14997987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr28:15043715-15043942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr28:34134013-34133782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
96-324
               

               
Cow position:
               
chr28:5827084-5826871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr28:25596775-25596548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
100-296
               

               
Cow position:
               
chr28:7776356-7776557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr28:5577676-5577445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr28:30746588-30746808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr28:28164230-28164006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
104-311
               

               
Cow position:
               
chr28:29434286-29434500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 209
               

               
Conread position:
               
104-320
               

               
Cow position:
               
chr28:4355688-4355478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
104-322
               

               
Cow position:
               
chr28:4159097-4158874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
106-228
               

               
Cow position:
               
chr28:3246399-3246276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr28:11686894-11687108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
108-321
               

               
Cow position:
               
chr28:34561473-34561268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr28:24707035-24706824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
110-239
               

               
Cow position:
               
chr28:12385158-12385289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
110-253
               

               
Cow position:
               
chr28:3397068-3397207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr28:2772846-2772691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
110-277
               

               
Cow position:
               
chr28:32179830-32179665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
110-285
               

               
Cow position:
               
chr28:7498011-7498192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-287
               

               
Cow position:
               
chr28:4873209-4873393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr28:4188689-4188494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
110-296
               

               
Cow position:
               
chr28:8149496-8149679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
110-320
               

               
Cow position:
               
chr28:4841256-4841474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
110-321
               

               
Cow position:
               
chr28:12964705-12964490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr28:2131788-2132002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 197
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:1632521-1632735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:2752358-2752575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:2899125-2898918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:8147728-8147942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:10172287-10172494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:19222016-19222230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
111-296
               

               
Cow position:
               
chr28:25400004-25399819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
111-310
               

               
Cow position:
               
chr28:29199865-29199652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
111-323
               

               
Cow position:
               
chr28:8021971-8022189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr28:19025870-19026092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr28:32174764-32174549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr28:6971214-6971429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 199
               

               
Conread position:
               
112-324
               

               
Cow position:
               
chr28:7388638-7388848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
113-240
               

               
Cow position:
               
chr28:18533774-18533903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
113-255
               

               
Cow position:
               
chr28:28501361-28501221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
113-269
               

               
Cow position:
               
chr28:4051329-4051175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr28:17601421-17601603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
113-322
               

               
Cow position:
               
chr28:11348554-11348351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr28:2960696-2960912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 199
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr28:5144388-5144598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr28:20409519-20409312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr28:33052169-33051948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 205
               

               
Conread position:
               
115-304
               

               
Cow position:
               
chr28:4765804-4765614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
115-321
               

               
Cow position:
               
chr28:25806700-25806495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
115-321
               

               
Cow position:
               
chr28:30865548-30865342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
116-263
               

               
Cow position:
               
chr28:4248523-4248671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
116-267
               

               
Cow position:
               
chr28:22147888-22148038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr28:11752011-11752216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr28:12070361-12070155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
117-322
               

               
Cow position:
               
chr28:24018110-24017914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
189, 108
               

               
Conread position:
               
118-249
               

               
Cow position:
               
chr28:25675384-25675511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
119-296
               

               
Cow position:
               
chr28:4438838-4438656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
123-324
               

               
Cow position:
               
chr28:26922245-26922447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
124-321
               

               
Cow position:
               
chr28:16245943-16246146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
125-267
               

               
Cow position:
               
chr28:4361330-4361473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr28:7372002-7372201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
128-324
               

               
Cow position:
               
chr28:2862983-2862785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
139, 163
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chr28:7228281-7228462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
134-323
               

               
Cow position:
               
chr28:14649451-14649269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
135-303
               

               
Cow position:
               
chr28:31109896-31110064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 137
               

               
Conread position:
               
135-305
               

               
Cow position:
               
chr28:7805314-7805487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
135, 102
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr28:7865437-7865246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 175
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr28:11500776-11500966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr28:18934562-18934373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
135-324
               

               
Cow position:
               
chr28:14512641-14512441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 180
               

               
Conread position:
               
136-324
               

               
Cow position:
               
chr28:13865946-13865762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
137-266
               

               
Cow position:
               
chr28:3147585-3147459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr28:2762301-2762142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
137-315
               

               
Cow position:
               
chr28:4179657-4179482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
137-322
               

               
Cow position:
               
chr28:18591376-18591189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
137-323
               

               
Cow position:
               
chr28:12619680-12619489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr28:2873025-2872837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 131
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr28:3169083-3169275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr28:21380985-21380798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr28:21598144-21598334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 161
               

               
Conread position:
               
138-324
               

               
Cow position:
               
chr28:11786612-11786792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 161
               

               
Conread position:
               
138-324
               

               
Cow position:
               
chr28:32365949-32365762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 169
               

               
Conread position:
               
139-324
               

               
Cow position:
               
chr28:26614977-26614806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chr28:23676241-23676060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 137
               

               
Conread position:
               
143-324
               

               
Cow position:
               
chr28:18186656-18186474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
144-242
               

               
Cow position:
               
chr28:14460673-14460575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-323
               

               
Cow position:
               
chr28:4536552-4536377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
158-322
               

               
Cow position:
               
chr28:21672878-21672718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
165-274
               

               
Cow position:
               
chr28:17393855-17393745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
165-324
               

               
Cow position:
               
chr28:10745292-10745132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 114
               

               
Conread position:
               
169-324
               

               
Cow position:
               
chr28:12363083-12363241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
174-324
               

               
Cow position:
               
chr28:7548989-7549140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 133
               

               
Conread position:
               
181-321
               

               
Cow position:
               
chr28:7751239-7751380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
182-324
               

               
Cow position:
               
chr28:2737745-2737888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
183-324
               

               
Cow position:
               
chr28:3256858-3256717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 84
               

               
Conread position:
               
201-321
               

               
Cow position:
               
chr28:5904774-5904654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
213-324
               

               
Cow position:
               
chr28:7607946-7608060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 89
               
Show alignments to all cow chromosomes.