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Cow genome map

           
Conread name:
           
reru19c_i21.y1
        

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:54390774-54391062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr4:65950888-65950562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr4:37732245-37732576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:65806132-65805889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr4:44854058-44854324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:60302787-60303052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr4:50687630-50687884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr4:14020732-14020465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:26012619-26012333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr4:26830926-26830639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr4:47038999-47038700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr4:54455116-54455433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr4:28771843-28772161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr4:42423575-42423879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr4:44772812-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr4:15439811-15439486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr4:19582387-19582710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 204
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr4:52780077-52779759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr4:1775225-1775440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:39007727-39007495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr4:28836758-28836443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr4:10915601-10915934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr4:29805146-29805461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr4:7698491-7698229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr4:45076859-45077164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr4:32789795-32790012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr4:20124748-20125014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr4:54927209-54927537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
13-265
               

               
Cow position:
               
chr4:5728049-5727810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
13-324
               

               
Cow position:
               
chr4:32259618-32259938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr4:39010272-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
14-245
               

               
Cow position:
               
chr4:69497333-69497101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr4:28839828-28839533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
15-236
               

               
Cow position:
               
chr4:13140882-13141099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
15-322
               

               
Cow position:
               
chr4:20026886-20027197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr4:30250050-30250239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
16-217
               

               
Cow position:
               
chr4:22215296-22215497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
16-280
               

               
Cow position:
               
chr4:22137995-22138270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
16-304
               

               
Cow position:
               
chr4:48423089-48422801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
17-253
               

               
Cow position:
               
chr4:18098843-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
17-266
               

               
Cow position:
               
chr4:60442826-60443077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr4:23846834-23847141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr4:47305296-47305023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
18-322
               

               
Cow position:
               
chr4:52823182-52823500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr4:2099853-2099544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr4:21391603-21391906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr4:25356109-25356400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr4:51899236-51898914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr4:62317666-62317352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr4:8083594-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 16
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr4:49794862-49794579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
245, 27
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr4:38209761-38210017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
22-323
               

               
Cow position:
               
chr4:20327506-20327803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
23-316
               

               
Cow position:
               
chr4:66547552-66547854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr4:43579206-43579393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr4:21275398-21275593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr4:4295788-4295563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr4:4084893-4085214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr4:34165773-34166070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr4:30769240-30769032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr4:38940734-38940948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
25-263
               

               
Cow position:
               
chr4:49158585-49158831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
25-321
               

               
Cow position:
               
chr4:26335159-26335459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
25-324
               

               
Cow position:
               
chr4:3688143-3687830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 273
               

               
Conread position:
               
25-324
               

               
Cow position:
               
chr4:59277266-59277569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
26-206
               

               
Cow position:
               
chr4:25929416-25929241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
26-251
               

               
Cow position:
               
chr4:60527388-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
26-271
               

               
Cow position:
               
chr4:35638699-35638943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
26-324
               

               
Cow position:
               
chr4:19315801-19316095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr4:28660339-28660532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
27-267
               

               
Cow position:
               
chr4:34653667-34653905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
27-321
               

               
Cow position:
               
chr4:11969662-11969372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
28-311
               

               
Cow position:
               
chr4:48486205-48485910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
28-317
               

               
Cow position:
               
chr4:3837476-3837186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
28-321
               

               
Cow position:
               
chr4:62983352-62983644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr4:22482527-22482320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
29-282
               

               
Cow position:
               
chr4:67393300-67393043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
29-321
               

               
Cow position:
               
chr4:47731072-47730765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
46, 292
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr4:29291710-29291427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr4:29384037-29384315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
31-236
               

               
Cow position:
               
chr4:56410547-56410340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
31-265
               

               
Cow position:
               
chr4:60141330-60141551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr4:4320789-4321093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
32-202
               

               
Cow position:
               
chr4:12713814-12713998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr4:46883467-46883710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr4:3341158-3340858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr4:19573496-19573194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr4:46136951-46136658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
32-324
               

               
Cow position:
               
chr4:61066956-61066681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
33-300
               

               
Cow position:
               
chr4:65173309-65173035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 257
               

               
Conread position:
               
33-304
               

               
Cow position:
               
chr4:8182430-8182714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
34-254
               

               
Cow position:
               
chr4:60363558-60363327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
34-321
               

               
Cow position:
               
chr4:32458656-32458952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
34-321
               

               
Cow position:
               
chr4:45685653-45685375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr4:12676995-12676712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
35-324
               

               
Cow position:
               
chr4:41370743-41371034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
36-201
               

               
Cow position:
               
chr4:12908571-12908403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
36-253
               

               
Cow position:
               
chr4:12048076-12047850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
36-320
               

               
Cow position:
               
chr4:21065221-21064946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
36-324
               

               
Cow position:
               
chr4:22009864-22010158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
37-324
               

               
Cow position:
               
chr4:20147380-20147092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr4:18952175-18951929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr4:55508054-55508337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
38-324
               

               
Cow position:
               
chr4:23509790-23509500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
38-324
               

               
Cow position:
               
chr4:34699848-34700131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 34
               

               
Conread position:
               
38-324
               

               
Cow position:
               
chr4:51728273-51727983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
39-293
               

               
Cow position:
               
chr4:62370504-62370253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
242, 41
               

               
Conread position:
               
41-202
               

               
Cow position:
               
chr4:20153357-20153520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr4:27657169-27656985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
41-229
               

               
Cow position:
               
chr4:29843012-29842828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr4:61887838-61887635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
41-271
               

               
Cow position:
               
chr4:68590967-68590737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
41-280
               

               
Cow position:
               
chr4:16221674-16221924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 242
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr4:19199091-19199353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
41-295
               

               
Cow position:
               
chr4:17851064-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
41-320
               

               
Cow position:
               
chr4:19292906-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
41-320
               

               
Cow position:
               
chr4:44183927-44184200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
41-321
               

               
Cow position:
               
chr4:40414432-40414720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr4:20184882-20184616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr4:68234156-68233877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
41-323
               

               
Cow position:
               
chr4:19102681-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
41-323
               

               
Cow position:
               
chr4:31136947-31136659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr4:1015263-1014975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr4:19500895-19501181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr4:22101068-22101353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
42-295
               

               
Cow position:
               
chr4:28701550-28701289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
44-255
               

               
Cow position:
               
chr4:4150234-4150030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
44-321
               

               
Cow position:
               
chr4:3283260-3283538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
44-321
               

               
Cow position:
               
chr4:3421814-3421531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
44-324
               

               
Cow position:
               
chr4:46476748-46477046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
47-210
               

               
Cow position:
               
chr4:57590476-57590649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
47-309
               

               
Cow position:
               
chr4:62472277-62472002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 272
               

               
Conread position:
               
47-321
               

               
Cow position:
               
chr4:19097476-19097197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
48-189
               

               
Cow position:
               
chr4:14965015-14964870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
48-202
               

               
Cow position:
               
chr4:12716702-12716867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr4:33360292-33360099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr4:42373955-42374164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
48-299
               

               
Cow position:
               
chr4:22071483-22071723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
48-299
               

               
Cow position:
               
chr4:59001949-59002203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
48-302
               

               
Cow position:
               
chr4:69290552-69290811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr4:19430551-19430286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr4:24371668-24371948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr4:37935103-37935377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr4:38944071-38944351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
48-324
               

               
Cow position:
               
chr4:68387977-68387698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
50-189
               

               
Cow position:
               
chr4:19504108-19503970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr4:31178008-31177789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr4:45837443-45837696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr4:52748264-52748551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 159
               

               
Conread position:
               
51-322
               

               
Cow position:
               
chr4:34337094-34337364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr4:41907400-41907596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
52-321
               

               
Cow position:
               
chr4:26333018-26333292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr4:48409103-48409363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
53-321
               

               
Cow position:
               
chr4:66172611-66172890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
54-296
               

               
Cow position:
               
chr4:36517305-36517552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
54-321
               

               
Cow position:
               
chr4:19578577-19578307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
54-322
               

               
Cow position:
               
chr4:17774170-17774445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
55-313
               

               
Cow position:
               
chr4:34369286-34369536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
55-321
               

               
Cow position:
               
chr4:61897373-61897625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
55-324
               

               
Cow position:
               
chr4:13693495-13693767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
56-199
               

               
Cow position:
               
chr4:56513833-56513976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
56-226
               

               
Cow position:
               
chr4:54500852-54501018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr4:23450914-23451188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
59-206
               

               
Cow position:
               
chr4:12720304-12720151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
59-302
               

               
Cow position:
               
chr4:34510018-34509766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
59-309
               

               
Cow position:
               
chr4:60719281-60719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 257
               

               
Conread position:
               
59-310
               

               
Cow position:
               
chr4:7847098-7847358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 218
               

               
Conread position:
               
59-319
               

               
Cow position:
               
chr4:63471901-63472162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
59-323
               

               
Cow position:
               
chr4:23600343-23600085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr4:9925450-9925719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 235
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr4:27530301-27530024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 259
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr4:44449346-44449597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
61-199
               

               
Cow position:
               
chr4:10412538-10412398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
61-209
               

               
Cow position:
               
chr4:22331307-22331146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr4:56805350-56805194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr4:32602013-32601834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
61-247
               

               
Cow position:
               
chr4:61268365-61268175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
61-254
               

               
Cow position:
               
chr4:42231846-42232046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
61-254
               

               
Cow position:
               
chr4:43542306-43542494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
61-299
               

               
Cow position:
               
chr4:20141801-20142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr4:53126284-53126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
61-321
               

               
Cow position:
               
chr4:22344841-22345113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
61-322
               

               
Cow position:
               
chr4:68889392-68889654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr4:46494488-46494203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
19, 219
               

               
Conread position:
               
62-225
               

               
Cow position:
               
chr4:36070877-36070706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
62-238
               

               
Cow position:
               
chr4:30691177-30690996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
62-272
               

               
Cow position:
               
chr4:26959791-26960009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
62-274
               

               
Cow position:
               
chr4:46049832-46050043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
62-277
               

               
Cow position:
               
chr4:60506451-60506229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
62-292
               

               
Cow position:
               
chr4:34562554-34562317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
62-322
               

               
Cow position:
               
chr4:56239689-56239946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr4:961490-961755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr4:16881198-16881456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr4:27632616-27632357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr4:35982173-35981900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr4:54938055-54937796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
63-218
               

               
Cow position:
               
chr4:479617-479779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
63-314
               

               
Cow position:
               
chr4:38999601-38999344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
63-323
               

               
Cow position:
               
chr4:45626456-45626714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
63-324
               

               
Cow position:
               
chr4:20157247-20157510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
65-323
               

               
Cow position:
               
chr4:43865689-43865948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
65-324
               

               
Cow position:
               
chr4:25888676-25888923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr4:37313340-37313076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
67-323
               

               
Cow position:
               
chr4:59785488-59785226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
67-324
               

               
Cow position:
               
chr4:45595874-45596123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
69-310
               

               
Cow position:
               
chr4:37991755-37991518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
69-322
               

               
Cow position:
               
chr4:33970738-33970995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr4:23646704-23646939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr4:24810286-24810534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr4:45074229-45073971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr4:44613164-44612914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
71-203
               

               
Cow position:
               
chr4:30944118-30943982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
72-253
               

               
Cow position:
               
chr4:21506803-21506978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
72-298
               

               
Cow position:
               
chr4:26659463-26659229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr4:13590250-13590002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
72-321
               

               
Cow position:
               
chr4:33100644-33100906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
72-322
               

               
Cow position:
               
chr4:53134760-53134506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
72-323
               

               
Cow position:
               
chr4:15905269-15905006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr4:10732383-10732130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr4:12004381-12004132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr4:19119182-19118913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr4:25537713-25537452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr4:36841426-36841190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
73-194
               

               
Cow position:
               
chr4:2770233-2770110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
73-229
               

               
Cow position:
               
chr4:53380853-53380689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr4:43740693-43740472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
73-323
               

               
Cow position:
               
chr4:54789804-54789547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr4:12127477-12127729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
74-323
               

               
Cow position:
               
chr4:34383176-34383435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr4:4084295-4084541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
75-229
               

               
Cow position:
               
chr4:51083181-51083336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr4:47230833-47230997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr4:47283848-47284012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr4:10851292-10851515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
77-324
               

               
Cow position:
               
chr4:17052433-17052694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 88
               

               
Conread position:
               
79-238
               

               
Cow position:
               
chr4:54650328-54650492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
79-322
               

               
Cow position:
               
chr4:11871769-11871999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
80-322
               

               
Cow position:
               
chr4:45013017-45013255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
80-324
               

               
Cow position:
               
chr4:65265152-65265404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
81-307
               

               
Cow position:
               
chr4:68456767-68456996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
82-259
               

               
Cow position:
               
chr4:69305782-69305600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 180
               

               
Conread position:
               
82-324
               

               
Cow position:
               
chr4:63964837-63965082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
83-294
               

               
Cow position:
               
chr4:214166-213949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
83-324
               

               
Cow position:
               
chr4:202989-203235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
84-187
               

               
Cow position:
               
chr4:42608891-42608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-195
               

               
Cow position:
               
chr4:27425861-27425747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-196
               

               
Cow position:
               
chr4:66509778-66509672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-202
               

               
Cow position:
               
chr4:39569349-39569232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-209
               

               
Cow position:
               
chr4:34919122-34919248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
84-209
               

               
Cow position:
               
chr4:65291712-65291834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
84-222
               

               
Cow position:
               
chr4:28854123-28854263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
84-223
               

               
Cow position:
               
chr4:3519571-3519429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
84-224
               

               
Cow position:
               
chr4:47048269-47048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-229
               

               
Cow position:
               
chr4:54785779-54785925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
84-229
               

               
Cow position:
               
chr4:62794204-62794361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
84-238
               

               
Cow position:
               
chr4:561783-561625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
84-250
               

               
Cow position:
               
chr4:34983351-34983515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
84-251
               

               
Cow position:
               
chr4:43916442-43916268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
84-251
               

               
Cow position:
               
chr4:61391082-61391246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
84-253
               

               
Cow position:
               
chr4:19090042-19089872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
84-253
               

               
Cow position:
               
chr4:33838651-33838822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
84-254
               

               
Cow position:
               
chr4:46560331-46560157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
84-263
               

               
Cow position:
               
chr4:46404756-46404936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
84-264
               

               
Cow position:
               
chr4:23656130-23655941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr4:386242-386426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
84-265
               

               
Cow position:
               
chr4:17051132-17051321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
84-268
               

               
Cow position:
               
chr4:10558689-10558497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-271
               

               
Cow position:
               
chr4:65753103-65753290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
84-274
               

               
Cow position:
               
chr4:3268218-3268405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr4:33181700-33181497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-285
               

               
Cow position:
               
chr4:6653876-6653669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr4:64040261-64040063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr4:1060127-1060334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
84-296
               

               
Cow position:
               
chr4:49800848-49800627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
84-304
               

               
Cow position:
               
chr4:54871871-54872101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
84-311
               

               
Cow position:
               
chr4:65463361-65463579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr4:46566318-46566555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr4:19333538-19333309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 185
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr4:508756-508998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 187
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr4:17186197-17186441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr4:19597180-19597406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
218, 51
               

               
Conread position:
               
84-322
               

               
Cow position:
               
chr4:48152219-48152462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
84-323
               

               
Cow position:
               
chr4:16762584-16762821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
84-323
               

               
Cow position:
               
chr4:37915186-37915430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 141
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:275596-275370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:4186270-4186032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:4319002-4319240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:16513375-16513613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:19435402-19435166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:21531488-21531737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:22546691-22546931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:30974486-30974247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:38156941-38157184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:51851364-51851113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 227
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:52831863-52832111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:53208435-53208201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:54171777-54171534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
48, 185
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:58248555-58248308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:66256834-66256593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
84-324
               

               
Cow position:
               
chr4:68569492-68569745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
85-199
               

               
Cow position:
               
chr4:61524582-61524464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
85-229
               

               
Cow position:
               
chr4:19123023-19122874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
85-244
               

               
Cow position:
               
chr4:13995539-13995374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
85-269
               

               
Cow position:
               
chr4:68806154-68805975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 50
               

               
Conread position:
               
85-280
               

               
Cow position:
               
chr4:85845-85645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 162
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr4:13344687-13344453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
85-321
               

               
Cow position:
               
chr4:44903435-44903194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr4:21874329-21874081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
38, 204
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr4:38935512-38935263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
86-239
               

               
Cow position:
               
chr4:56395666-56395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
86-246
               

               
Cow position:
               
chr4:29317916-29318091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
86-312
               

               
Cow position:
               
chr4:1026085-1026318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr4:7571560-7571318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr4:1419374-1419130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr4:19745019-19744792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
182, 43
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr4:34022436-34022680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr4:62920726-62920950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
87-212
               

               
Cow position:
               
chr4:59015731-59015606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr4:26901471-26901305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr4:12591067-12591304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr4:36290769-36290535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 180
               

               
Conread position:
               
90-241
               

               
Cow position:
               
chr4:17790148-17790302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr4:11194329-11194091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr4:56591186-56590948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
90-324
               

               
Cow position:
               
chr4:63095931-63096167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
91-311
               

               
Cow position:
               
chr4:570935-570708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
91-321
               

               
Cow position:
               
chr4:65649998-65650215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
92-250
               

               
Cow position:
               
chr4:61608823-61608984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr4:33096841-33097069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr4:46455921-46456153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr4:63769979-63769754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr4:11099516-11099760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 228
               

               
Conread position:
               
95-268
               

               
Cow position:
               
chr4:59625810-59625640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
95-320
               

               
Cow position:
               
chr4:7808712-7808485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
96-324
               

               
Cow position:
               
chr4:69455489-69455718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
100-230
               

               
Cow position:
               
chr4:51708199-51708066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
100-254
               

               
Cow position:
               
chr4:19539103-19539260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
100-299
               

               
Cow position:
               
chr4:22842472-22842269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
100-321
               

               
Cow position:
               
chr4:13326822-13327043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
100-323
               

               
Cow position:
               
chr4:2602364-2602140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr4:16594213-16593989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
104-245
               

               
Cow position:
               
chr4:1236744-1236887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
104-257
               

               
Cow position:
               
chr4:58305777-58305931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
104-296
               

               
Cow position:
               
chr4:45706168-45705979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
104-322
               

               
Cow position:
               
chr4:36731318-36731103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr4:14153237-14153000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 220
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr4:17084209-17084433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr4:42921736-42921943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr4:48396668-48396886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:11380409-11380192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:13222057-13222276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:19700225-19700013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:34211297-34211073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:36577497-36577723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr4:51769230-51769018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr4:48961358-48961579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr4:34503424-34503199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
35, 207
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr4:21532969-21533090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
107-227
               

               
Cow position:
               
chr4:46761734-46761611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
107-240
               

               
Cow position:
               
chr4:32353321-32353457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
107-295
               

               
Cow position:
               
chr4:39984533-39984329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
107-317
               

               
Cow position:
               
chr4:54478795-54478993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
107-322
               

               
Cow position:
               
chr4:54524221-54524427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr4:12903947-12903725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 203
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr4:21874927-21874717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr4:34631022-34630800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 204
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr4:46591793-46591572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr4:51784307-51784085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
108-304
               

               
Cow position:
               
chr4:54920964-54921162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr4:26401080-26400869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
110-202
               

               
Cow position:
               
chr4:28570221-28570126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-207
               

               
Cow position:
               
chr4:20276827-20276729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
110-210
               

               
Cow position:
               
chr4:19580632-19580734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-211
               

               
Cow position:
               
chr4:48321400-48321502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
110-227
               

               
Cow position:
               
chr4:11512588-11512706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
110-250
               

               
Cow position:
               
chr4:32272853-32272993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
110-250
               

               
Cow position:
               
chr4:50676048-50676189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr4:10472315-10472155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr4:48381502-48381347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
110-268
               

               
Cow position:
               
chr4:12135803-12135964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
110-271
               

               
Cow position:
               
chr4:51920668-51920504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-273
               

               
Cow position:
               
chr4:45862536-45862375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr4:19431573-19431738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 159
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr4:46435448-46435265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr4:48902501-48902683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
110-295
               

               
Cow position:
               
chr4:3251423-3251618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
110-298
               

               
Cow position:
               
chr4:20142788-20142976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
110-301
               

               
Cow position:
               
chr4:19542256-19542073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
110-313
               

               
Cow position:
               
chr4:12901434-12901639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr4:1995-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 193
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr4:19098596-19098380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 205
               

               
Conread position:
               
110-321
               

               
Cow position:
               
chr4:46550508-46550292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
110-321
               

               
Cow position:
               
chr4:59871593-59871389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
196, 26
               

               
Conread position:
               
110-322
               

               
Cow position:
               
chr4:45636290-45636072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr4:42673296-42673082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
160, 44
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:8947518-8947300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:9815223-9815441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:13941580-13941369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:16814506-16814299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:33612244-33612452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:37675738-37675522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:44782498-44782280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 107
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:45775214-45775433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:47510506-47510297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:48173260-48173046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 180
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:54191213-54190995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:58880838-58881056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:59378033-59377821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 191
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr4:65919730-65919520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
111-263
               

               
Cow position:
               
chr4:15462128-15462285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
111-302
               

               
Cow position:
               
chr4:19324097-19323900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
111-317
               

               
Cow position:
               
chr4:53346448-53346241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
111-321
               

               
Cow position:
               
chr4:64657180-64657386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
111-323
               

               
Cow position:
               
chr4:45583000-45583211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr4:45644195-45644401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
112-290
               

               
Cow position:
               
chr4:36744700-36744523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr4:54541517-54541707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
112-311
               

               
Cow position:
               
chr4:19493674-19493472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
112-324
               

               
Cow position:
               
chr4:32726347-32726133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
112-324
               

               
Cow position:
               
chr4:36893479-36893264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
113-254
               

               
Cow position:
               
chr4:46702539-46702681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr4:34641612-34641819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr4:47348945-47348734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
114-225
               

               
Cow position:
               
chr4:5047026-5047140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
114-264
               

               
Cow position:
               
chr4:65179031-65179183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
114-289
               

               
Cow position:
               
chr4:65131334-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
114-324
               

               
Cow position:
               
chr4:33433138-33433357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 200
               

               
Conread position:
               
114-324
               

               
Cow position:
               
chr4:41185800-41186002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
115-321
               

               
Cow position:
               
chr4:37704384-37704176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr4:19407879-19408091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
115-324
               

               
Cow position:
               
chr4:38952666-38952459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
115-324
               

               
Cow position:
               
chr4:45563865-45563649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
115-324
               

               
Cow position:
               
chr4:62771804-62772018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr4:39128655-39128441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr4:25879507-25879305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr4:69543299-69543090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 190
               

               
Conread position:
               
118-321
               

               
Cow position:
               
chr4:2141850-2141655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr4:45738359-45738571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
119-302
               

               
Cow position:
               
chr4:20504976-20505154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr4:65175030-65175230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr4:3850662-3850459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
142, 5
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr4:12442002-12441850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr4:13241732-13241580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
120-319
               

               
Cow position:
               
chr4:61313099-61313298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
122-250
               

               
Cow position:
               
chr4:22196107-22196230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
122-324
               

               
Cow position:
               
chr4:54111849-54111656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
123-324
               

               
Cow position:
               
chr4:25984327-25984132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chr4:42176367-42176538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr4:66136505-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr4:8413017-8413211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
129-304
               

               
Cow position:
               
chr4:61235102-61235277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr4:5963885-5964069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
129-323
               

               
Cow position:
               
chr4:17111772-17111969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
129-324
               

               
Cow position:
               
chr4:24001865-24002060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
132-318
               

               
Cow position:
               
chr4:49826350-49826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chr4:5460764-5460956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 149
               

               
Conread position:
               
135-323
               

               
Cow position:
               
chr4:56570902-56570715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
135-324
               

               
Cow position:
               
chr4:13026397-13026209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
136-285
               

               
Cow position:
               
chr4:41291859-41292007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
137-269
               

               
Cow position:
               
chr4:56336759-56336629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
137-304
               

               
Cow position:
               
chr4:61478699-61478527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
137-311
               

               
Cow position:
               
chr4:39609811-39609646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
169, 36
               

               
Conread position:
               
137-320
               

               
Cow position:
               
chr4:69169739-69169565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
137-321
               

               
Cow position:
               
chr4:24481579-24481760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
137-321
               

               
Cow position:
               
chr4:41867529-41867348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
137-322
               

               
Cow position:
               
chr4:53100895-53100707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 144
               

               
Conread position:
               
137-323
               

               
Cow position:
               
chr4:55395855-55395669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr4:21006-20825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr4:10379205-10379015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 172
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr4:12049340-12049152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr4:19314107-19313918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
138-309
               

               
Cow position:
               
chr4:8940-9110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr4:13990866-13991034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
138-324
               

               
Cow position:
               
chr4:45799964-45799781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
139-265
               

               
Cow position:
               
chr4:63459131-63459259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
139-321
               

               
Cow position:
               
chr4:33395606-33395791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 169
               

               
Conread position:
               
141-321
               

               
Cow position:
               
chr4:21257034-21257217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 168
               

               
Conread position:
               
141-324
               

               
Cow position:
               
chr4:16601973-16602146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
142-304
               

               
Cow position:
               
chr4:46487752-46487917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
143-324
               

               
Cow position:
               
chr4:20139429-20139610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
146-324
               

               
Cow position:
               
chr4:16799101-16799281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
113, 161
               

               
Conread position:
               
146-324
               

               
Cow position:
               
chr4:65432235-65432055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 151
               

               
Conread position:
               
150-304
               

               
Cow position:
               
chr4:620054-620208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
150-324
               

               
Cow position:
               
chr4:51730031-51729859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
152-324
               

               
Cow position:
               
chr4:21232795-21232967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
154-323
               

               
Cow position:
               
chr4:66111994-66112165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 154
               

               
Conread position:
               
154-324
               

               
Cow position:
               
chr4:11332174-11331999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
155-322
               

               
Cow position:
               
chr4:60131301-60131131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 154
               

               
Conread position:
               
155-323
               

               
Cow position:
               
chr4:2885464-2885634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 153
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr4:20299346-20299181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
162-296
               

               
Cow position:
               
chr4:13771332-13771468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
113, 130
               

               
Conread position:
               
162-323
               

               
Cow position:
               
chr4:44973703-44973545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
162-324
               

               
Cow position:
               
chr4:24744337-24744502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
165-324
               

               
Cow position:
               
chr4:67466788-67466629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
116, 140
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr4:14470506-14470663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
170-321
               

               
Cow position:
               
chr4:39231460-39231613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
181-324
               

               
Cow position:
               
chr4:12920319-12920178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
193-324
               

               
Cow position:
               
chr4:2096360-2096227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
193-324
               

               
Cow position:
               
chr4:19463534-19463402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 113
               
Show alignments to all cow chromosomes.