Cow genome map
| Conread name: | reye1614b_d12.y1 |
| Conread position: | 1-173 |
| Cow position: | chr17:22551673-22551501 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-185 |
| Cow position: | chr17:22473337-22473521 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-207 |
| Cow position: | chr17:22473421-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 1-207 |
| Cow position: | chr17:22498972-22498766 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-246 |
| Cow position: | chr17:22589427-22589182 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 1-247 |
| Cow position: | chr17:22451958-22451712 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 124 |
| Conread position: | 1-247 |
| Cow position: | chr17:22452210-22451964 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr17:22473589-22473835 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 1-247 |
| Cow position: | chr17:22473673-22473919 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr17:22499140-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 204, 195 |
| Conread position: | 1-247 |
| Cow position: | chr17:22499224-22498978 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 1-247 |
| Cow position: | chr17:22499392-22499146 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr17:22551925-22551679 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr17:22552765-22552519 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22551757-22551510 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552093-22551846 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552429-22552182 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552513-22552266 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 140, 147 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552681-22552434 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552849-22552602 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22552933-22552686 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22553101-22552854 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22589511-22589264 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr17:22589595-22589348 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 205, 213 |
| Conread position: | 1-248 |
| Cow position: | chr17:22590183-22589936 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-224 |
| Cow position: | chr17:22590014-22589792 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-245 |
| Cow position: | chr17:22452041-22451798 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 2-248 |
| Cow position: | chr17:22589846-22589600 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-248 |
| Cow position: | chr17:22589930-22589684 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 3-181 |
| Cow position: | chr17:22498718-22498540 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 3-244 |
| Cow position: | chr17:22589677-22589436 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:22551839-22551594 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 201, 193 |
| Conread position: | 3-248 |
| Cow position: | chr17:22552007-22551762 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:22552175-22551930 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:22552259-22552014 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:22552595-22552350 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr17:22589761-22589516 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 202, 192 |
| Conread position: | 4-245 |
| Cow position: | chr17:22452375-22452134 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-247 |
| Cow position: | chr17:22452121-22451880 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-248 |
| Cow position: | chr17:22553009-22552770 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-247 |
| Cow position: | chr17:22473262-22473499 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-248 |
| Cow position: | chr17:22590077-22589852 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 23-248 |
| Cow position: | chr17:22590245-22590020 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-247 |
| Cow position: | chr17:22553143-22552939 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 164, 157 |
| Conread position: | 43-248 |
| Cow position: | chr17:22590308-22590104 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.