Cow genome map
| Conread name: | reye1614b_d12.y1 |
| Conread position: | 1-173 |
| Cow position: | chr7:18390583-18390755 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-177 |
| Cow position: | chr7:3180622-3180798 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-244 |
| Cow position: | chr7:1439555-1439800 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 1-247 |
| Cow position: | chr7:1014772-1015018 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:3179782-3180028 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:3179866-3180112 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:3179950-3180196 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 1-247 |
| Cow position: | chr7:3180118-3180364 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:3180202-3180448 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:3180286-3180532 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 122, 128 |
| Conread position: | 1-247 |
| Cow position: | chr7:3180538-3180784 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:11600850-11600604 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 202, 195 |
| Conread position: | 1-247 |
| Cow position: | chr7:42878603-42878357 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 204, 195 |
| Conread position: | 1-247 |
| Cow position: | chr7:42878855-42878609 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 129 |
| Conread position: | 1-247 |
| Cow position: | chr7:42878939-42878693 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 1-247 |
| Cow position: | chr7:42879107-42878861 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-247 |
| Cow position: | chr7:42879275-42879029 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 79, 87 |
| Conread position: | 1-248 |
| Cow position: | chr7:1014940-1015187 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 138, 128 |
| Conread position: | 1-248 |
| Cow position: | chr7:1015024-1015271 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 225, 201 |
| Conread position: | 1-248 |
| Cow position: | chr7:1439892-1440138 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 204, 83 |
| Conread position: | 1-248 |
| Cow position: | chr7:3180454-3180701 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 1-248 |
| Cow position: | chr7:18390163-18390410 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 1-248 |
| Cow position: | chr7:18390247-18390494 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 1-248 |
| Cow position: | chr7:42878687-42878440 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-248 |
| Cow position: | chr7:42878771-42878524 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 129 |
| Conread position: | 2-248 |
| Cow position: | chr7:1439472-1439721 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 205, 116 |
| Conread position: | 3-185 |
| Cow position: | chr7:11601100-11600918 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 3-213 |
| Cow position: | chr7:1014276-1014486 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-223 |
| Cow position: | chr7:1438504-1438723 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 3-246 |
| Cow position: | chr7:11600680-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 3-246 |
| Cow position: | chr7:42878517-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-247 |
| Cow position: | chr7:1014858-1015102 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-247 |
| Cow position: | chr7:3180036-3180280 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 201, 193 |
| Conread position: | 3-247 |
| Cow position: | chr7:3180372-3180616 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-247 |
| Cow position: | chr7:18390333-18390577 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-247 |
| Cow position: | chr7:42879021-42878777 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-247 |
| Cow position: | chr7:42879189-42878945 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-248 |
| Cow position: | chr7:1439639-1439887 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 9-248 |
| Cow position: | chr7:1439817-1440054 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 23-245 |
| Cow position: | chr7:1014380-1014602 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-247 |
| Cow position: | chr7:1014224-1014436 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 61-247 |
| Cow position: | chr7:18390139-18390325 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-247 |
| Cow position: | chr7:42879276-42879113 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.