Cow genome map


           Conread name:
           reye1618b_o19r1.y1
        

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 153
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 195
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 173
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 188
               

               Conread position:
               2-236
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               2-274
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 44
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               2-313
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               3-307
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               84, 230
               

               Conread position:
               11-170
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               24-223
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               24-251
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 146
               

               Conread position:
               25-159
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               26-163
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               43-264
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 148
               

               Conread position:
               50-273
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               39, 178
               

               Conread position:
               63-275
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               63-286
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               63-291
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               63-296
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               25, 185
               

               Conread position:
               63-321
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               64-190
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               65-223
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               65-275
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               82-282
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               84-291
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               86-307
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               95, 79
               

               Conread position:
               86-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               88-307
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               112-276
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               138-321
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               150-321
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 93
               

               Conread position:
               166-321
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               170-279
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               
Show alignments to all cow chromosomes.