Cow genome map


           Conread name:
           reye1618b_o19r1.y1
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 204
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               26, 224
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 214
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               24, 201
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 182
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 122
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 256
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               2-269
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               3-197
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               5-299
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               5-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               9-281
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               11-321
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               19-307
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               22-276
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               24-222
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               24-223
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 152
               

               Conread position:
               24-275
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               25-275
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               26-251
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               26-251
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               28-279
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               42-321
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               63-275
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               63-282
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               63-290
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               63-291
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               63-291
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 185
               

               Conread position:
               63-307
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               90-307
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               101-272
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 64
               

               Conread position:
               107-299
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               161-281
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               163-312
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 0
               
Show alignments to all cow chromosomes.