Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-168 |
| Cow position: | chr14:5570056-5569879 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-226 |
| Cow position: | chr14:26257462-26257691 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 1-226 |
| Cow position: | chr14:26260646-26260875 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 1-226 |
| Cow position: | chr14:40014021-40014248 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 1-226 |
| Cow position: | chr14:45780154-45779931 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 1-240 |
| Cow position: | chr14:45594623-45594374 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 194 |
| Conread position: | 1-242 |
| Cow position: | chr14:19838680-19838430 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 1-251 |
| Cow position: | chr14:28755066-28755306 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 1-271 |
| Cow position: | chr14:13153246-13153525 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 1-273 |
| Cow position: | chr14:3703290-3703023 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 1-275 |
| Cow position: | chr14:5356897-5357191 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 186 |
| Conread position: | 1-282 |
| Cow position: | chr14:16026281-16026566 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-292 |
| Cow position: | chr14:15756704-15756999 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 1-302 |
| Cow position: | chr14:10081862-10082166 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 2-211 |
| Cow position: | chr14:26040724-26040508 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 2-224 |
| Cow position: | chr14:16517467-16517697 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 2-227 |
| Cow position: | chr14:17394822-17394583 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 2-315 |
| Cow position: | chr14:32728713-32729023 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 3-276 |
| Cow position: | chr14:2343779-2343506 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 3-291 |
| Cow position: | chr14:45731142-45731427 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 3-321 |
| Cow position: | chr14:11104511-11104208 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 5-275 |
| Cow position: | chr14:44539203-44539483 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 9-306 |
| Cow position: | chr14:7149278-7149573 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 11-231 |
| Cow position: | chr14:23148892-23148666 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 24-286 |
| Cow position: | chr14:12246790-12246525 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 24-307 |
| Cow position: | chr14:10488818-10489106 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 25-275 |
| Cow position: | chr14:20887437-20887684 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 48-321 |
| Cow position: | chr14:11076007-11076279 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 49-276 |
| Cow position: | chr14:2279139-2279375 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 63-154 |
| Cow position: | chr14:6144547-6144455 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 63-224 |
| Cow position: | chr14:25473445-25473610 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 63-273 |
| Cow position: | chr14:20677771-20677564 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 63-274 |
| Cow position: | chr14:33534398-33534616 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 63-307 |
| Cow position: | chr14:23149866-23149622 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 184 |
| Conread position: | 69-275 |
| Cow position: | chr14:18439313-18439100 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 84-190 |
| Cow position: | chr14:33458726-33458832 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.