Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-185 |
| Cow position: | chr15:8284820-8284634 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 1-226 |
| Cow position: | chr15:1036852-1037085 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1-243 |
| Cow position: | chr15:44963032-44962776 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 1-271 |
| Cow position: | chr15:5274255-5274511 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 1-273 |
| Cow position: | chr15:433264-432991 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 1-274 |
| Cow position: | chr15:22337024-22336727 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-279 |
| Cow position: | chr15:26304506-26304781 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 1-307 |
| Cow position: | chr15:11676790-11677101 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 1-307 |
| Cow position: | chr15:16444721-16444412 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 1-320 |
| Cow position: | chr15:4332705-4332389 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 185 |
| Conread position: | 1-321 |
| Cow position: | chr15:44902592-44902275 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 1-321 |
| Cow position: | chr15:44903457-44903763 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 2-197 |
| Cow position: | chr15:42288795-42288998 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 2-220 |
| Cow position: | chr15:9370010-9369786 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 2-251 |
| Cow position: | chr15:30559916-30559657 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 212 |
| Conread position: | 2-274 |
| Cow position: | chr15:26133769-26133490 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 178 |
| Conread position: | 2-274 |
| Cow position: | chr15:28977237-28977504 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 9-154 |
| Cow position: | chr15:10748433-10748287 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 24-204 |
| Cow position: | chr15:39568915-39568727 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 24-214 |
| Cow position: | chr15:30945286-30945481 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 24-291 |
| Cow position: | chr15:14494441-14494718 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 234 |
| Conread position: | 63-283 |
| Cow position: | chr15:5000858-5001071 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 63-291 |
| Cow position: | chr15:29596609-29596838 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 63-307 |
| Cow position: | chr15:6148841-6149078 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 63-321 |
| Cow position: | chr15:18638915-18638662 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 78-235 |
| Cow position: | chr15:5224943-5224783 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 84-273 |
| Cow position: | chr15:45798098-45798286 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 98 |
| Conread position: | 84-275 |
| Cow position: | chr15:36382511-36382706 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 86-299 |
| Cow position: | chr15:39802473-39802263 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 158 |
Show alignments to all cow chromosomes.