Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-181 |
| Cow position: | chr16:21979788-21979978 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 1-193 |
| Cow position: | chr16:2250070-2249872 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 1-193 |
| Cow position: | chr16:15434006-15433805 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-193 |
| Cow position: | chr16:18054673-18054472 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-205 |
| Cow position: | chr16:33644170-33644383 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-223 |
| Cow position: | chr16:21558284-21558054 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-224 |
| Cow position: | chr16:4396735-4396497 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-227 |
| Cow position: | chr16:13497025-13497260 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-232 |
| Cow position: | chr16:15668972-15669206 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 95 |
| Conread position: | 1-271 |
| Cow position: | chr16:47871287-47871568 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 1-273 |
| Cow position: | chr16:2522430-2522157 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 1-275 |
| Cow position: | chr16:19491397-19491661 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 1-278 |
| Cow position: | chr16:3850427-3850713 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 198 |
| Conread position: | 1-281 |
| Cow position: | chr16:47743196-47742910 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 1-281 |
| Cow position: | chr16:53198254-53198540 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1-286 |
| Cow position: | chr16:23948289-23948011 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 1-293 |
| Cow position: | chr16:49979244-49978965 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-294 |
| Cow position: | chr16:49208367-49208658 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-306 |
| Cow position: | chr16:34614062-34613764 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 1-321 |
| Cow position: | chr16:24173552-24173876 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 2-172 |
| Cow position: | chr16:40122215-40122036 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 2-214 |
| Cow position: | chr16:17749331-17749544 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 2-276 |
| Cow position: | chr16:31531315-31531040 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 2-307 |
| Cow position: | chr16:37225485-37225791 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 11-251 |
| Cow position: | chr16:27274925-27275170 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 17-275 |
| Cow position: | chr16:48889757-48890021 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 19-273 |
| Cow position: | chr16:15913861-15914128 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 119 |
| Conread position: | 19-307 |
| Cow position: | chr16:23846512-23846793 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 22-282 |
| Cow position: | chr16:39021285-39021024 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 24-224 |
| Cow position: | chr16:56975588-56975793 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 25-213 |
| Cow position: | chr16:40516437-40516625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 26-231 |
| Cow position: | chr16:4614633-4614421 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 48-285 |
| Cow position: | chr16:40507367-40507604 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 48-291 |
| Cow position: | chr16:45132866-45133116 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 209 |
| Conread position: | 48-321 |
| Cow position: | chr16:27174252-27174532 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 212 |
| Conread position: | 49-222 |
| Cow position: | chr16:50323355-50323177 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 60-243 |
| Cow position: | chr16:1412103-1411916 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 63-211 |
| Cow position: | chr16:35280822-35280672 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 63-248 |
| Cow position: | chr16:31133369-31133180 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 63-263 |
| Cow position: | chr16:5651323-5651121 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 63-271 |
| Cow position: | chr16:30655184-30654972 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 63-274 |
| Cow position: | chr16:29661492-29661280 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 63-321 |
| Cow position: | chr16:52775455-52775708 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 79-321 |
| Cow position: | chr16:28198769-28198995 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 84-281 |
| Cow position: | chr16:40509039-40508850 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 84-282 |
| Cow position: | chr16:40518050-40518245 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
Show alignments to all cow chromosomes.