Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-169 |
| Cow position: | chr18:4480971-4480794 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 1-223 |
| Cow position: | chr18:2116921-2117157 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 185 |
| Conread position: | 1-251 |
| Cow position: | chr18:21737160-21737422 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-251 |
| Cow position: | chr18:43243753-43243488 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 1-261 |
| Cow position: | chr18:17220794-17221068 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 1-261 |
| Cow position: | chr18:17235442-17235716 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 1-271 |
| Cow position: | chr18:56216710-56216433 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 1-274 |
| Cow position: | chr18:4937610-4937343 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 1-275 |
| Cow position: | chr18:8340763-8341042 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 204 |
| Conread position: | 1-275 |
| Cow position: | chr18:21611672-21611954 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 1-275 |
| Cow position: | chr18:52708749-52708476 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 1-293 |
| Cow position: | chr18:55145869-55146165 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 1-306 |
| Cow position: | chr18:16559124-16559424 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 1-307 |
| Cow position: | chr18:52707172-52707482 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 140 |
| Conread position: | 1-321 |
| Cow position: | chr18:38308685-38309023 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 265 |
| Conread position: | 2-226 |
| Cow position: | chr18:24796380-24796143 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 3-275 |
| Cow position: | chr18:14140110-14139828 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 3-315 |
| Cow position: | chr18:8691514-8691816 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 22-306 |
| Cow position: | chr18:31954850-31955132 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 48-274 |
| Cow position: | chr18:48004634-48004401 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 63-224 |
| Cow position: | chr18:1707787-1707953 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 63-268 |
| Cow position: | chr18:30979060-30979256 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 64-274 |
| Cow position: | chr18:16028714-16028508 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 84-321 |
| Cow position: | chr18:21614470-21614687 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 88-275 |
| Cow position: | chr18:17118505-17118674 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 109-275 |
| Cow position: | chr18:11406450-11406289 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 174-307 |
| Cow position: | chr18:4937364-4937236 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.