Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-151 |
| Cow position: | chr2:74439406-74439254 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 1-163 |
| Cow position: | chr2:65334507-65334679 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-172 |
| Cow position: | chr2:45690166-45690345 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 1-190 |
| Cow position: | chr2:33219275-33219079 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 1-193 |
| Cow position: | chr2:5327746-5327946 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 1-221 |
| Cow position: | chr2:3713822-3713597 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-221 |
| Cow position: | chr2:68726982-68726754 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-224 |
| Cow position: | chr2:15339468-15339697 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 1-227 |
| Cow position: | chr2:29450503-29450739 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 1-232 |
| Cow position: | chr2:74694650-74694890 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 1-233 |
| Cow position: | chr2:46258462-46258218 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 1-244 |
| Cow position: | chr2:45113655-45113908 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-251 |
| Cow position: | chr2:19150342-19150085 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-251 |
| Cow position: | chr2:59163891-59163637 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 1-274 |
| Cow position: | chr2:81129935-81130214 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-275 |
| Cow position: | chr2:18088801-18089095 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-276 |
| Cow position: | chr2:57995978-57995706 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 1-281 |
| Cow position: | chr2:64174986-64175268 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 1-307 |
| Cow position: | chr2:42190960-42190654 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-307 |
| Cow position: | chr2:69641026-69640723 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 1-321 |
| Cow position: | chr2:856568-856883 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 59, 170 |
| Conread position: | 2-252 |
| Cow position: | chr2:49862066-49862325 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 2-306 |
| Cow position: | chr2:71461854-71461548 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 250 |
| Conread position: | 3-189 |
| Cow position: | chr2:70279171-70279365 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 3-263 |
| Cow position: | chr2:70177958-70177690 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 67, 221 |
| Conread position: | 3-291 |
| Cow position: | chr2:74482151-74482445 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 3-312 |
| Cow position: | chr2:27776802-27777115 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 4-291 |
| Cow position: | chr2:13332154-13332446 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 249 |
| Conread position: | 5-247 |
| Cow position: | chr2:376913-376661 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 6-265 |
| Cow position: | chr2:9509236-9508963 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 255 |
| Conread position: | 7-187 |
| Cow position: | chr2:528554-528736 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 11-190 |
| Cow position: | chr2:69924290-69924103 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 24-179 |
| Cow position: | chr2:15335812-15335971 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 24-208 |
| Cow position: | chr2:36951087-36950902 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 24-222 |
| Cow position: | chr2:74308081-74308274 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 136, 24 |
| Conread position: | 24-321 |
| Cow position: | chr2:10161030-10160742 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 24-321 |
| Cow position: | chr2:36951796-36951496 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 27-188 |
| Cow position: | chr2:76617999-76618161 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 63-226 |
| Cow position: | chr2:18448695-18448862 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 63-249 |
| Cow position: | chr2:46490267-46490459 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 63-251 |
| Cow position: | chr2:12854842-12855033 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 63-271 |
| Cow position: | chr2:42264892-42265100 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 63-291 |
| Cow position: | chr2:46448244-46448012 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 193 |
| Conread position: | 76-321 |
| Cow position: | chr2:47917329-47917565 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 84-275 |
| Cow position: | chr2:23648233-23648425 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 155 |
| Conread position: | 120-279 |
| Cow position: | chr2:35983447-35983603 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.