Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-182 |
| Cow position: | chr20:11066504-11066687 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 1-193 |
| Cow position: | chr20:39354304-39354505 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 1-223 |
| Cow position: | chr20:19121466-19121234 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 1-228 |
| Cow position: | chr20:26055958-26055720 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-230 |
| Cow position: | chr20:34964597-34964838 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 193 |
| Conread position: | 1-231 |
| Cow position: | chr20:20071352-20071117 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 1-251 |
| Cow position: | chr20:24000508-24000251 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 1-273 |
| Cow position: | chr20:3057478-3057204 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 1-273 |
| Cow position: | chr20:12324528-12324809 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 1-273 |
| Cow position: | chr20:16970762-16970492 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 1-275 |
| Cow position: | chr20:35815537-35815810 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 1-275 |
| Cow position: | chr20:39730653-39730390 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-275 |
| Cow position: | chr20:40093104-40092814 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 1-276 |
| Cow position: | chr20:18828811-18828521 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 1-283 |
| Cow position: | chr20:1128400-1128113 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 1-293 |
| Cow position: | chr20:41172090-41172390 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 32, 226 |
| Conread position: | 1-306 |
| Cow position: | chr20:30154331-30154034 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 1-307 |
| Cow position: | chr20:18783978-18784281 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 1-307 |
| Cow position: | chr20:34963483-34963781 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 1-307 |
| Cow position: | chr20:37071475-37071163 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-309 |
| Cow position: | chr20:5540664-5540976 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 1-312 |
| Cow position: | chr20:39973672-39973365 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 2-288 |
| Cow position: | chr20:23925212-23925505 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 2-291 |
| Cow position: | chr20:42107820-42107532 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 3-298 |
| Cow position: | chr20:40200878-40201163 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 3-305 |
| Cow position: | chr20:23913494-23913187 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 247 |
| Conread position: | 24-275 |
| Cow position: | chr20:4624401-4624135 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 56-226 |
| Cow position: | chr20:42915693-42915523 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 135, 13 |
| Conread position: | 63-218 |
| Cow position: | chr20:3054071-3053912 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 63-299 |
| Cow position: | chr20:32893973-32893739 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 77-251 |
| Cow position: | chr20:7145498-7145321 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 88 |
| Conread position: | 82-285 |
| Cow position: | chr20:13246103-13245908 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 84-275 |
| Cow position: | chr20:33190781-33190594 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 86-242 |
| Cow position: | chr20:4256717-4256877 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 121-274 |
| Cow position: | chr20:2885459-2885306 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-275 |
| Cow position: | chr20:23998800-23998661 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.