Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-148 |
| Cow position: | chr23:595524-595368 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 1-192 |
| Cow position: | chr23:18243952-18243748 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-193 |
| Cow position: | chr23:4652100-4651901 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-213 |
| Cow position: | chr23:665022-664798 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 1-222 |
| Cow position: | chr23:36437489-36437257 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 1-251 |
| Cow position: | chr23:7527213-7527471 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-251 |
| Cow position: | chr23:18568350-18568608 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-251 |
| Cow position: | chr23:26343222-26343476 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 1-256 |
| Cow position: | chr23:27918581-27918316 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 199 |
| Conread position: | 1-269 |
| Cow position: | chr23:12980318-12980591 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 1-273 |
| Cow position: | chr23:12972336-12972611 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 1-274 |
| Cow position: | chr23:1280627-1280341 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 257 |
| Conread position: | 1-285 |
| Cow position: | chr23:35164584-35164872 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 251 |
| Conread position: | 1-307 |
| Cow position: | chr23:596775-596470 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 1-307 |
| Cow position: | chr23:18986954-18987263 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 1-321 |
| Cow position: | chr23:27764-28084 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 1-321 |
| Cow position: | chr23:7522019-7521715 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 1-321 |
| Cow position: | chr23:9637425-9637103 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 2-197 |
| Cow position: | chr23:4634302-4634118 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-271 |
| Cow position: | chr23:20246006-20246285 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 192 |
| Conread position: | 3-225 |
| Cow position: | chr23:28882471-28882243 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 3-230 |
| Cow position: | chr23:14740996-14741229 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 3-271 |
| Cow position: | chr23:6048405-6048682 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 190 |
| Conread position: | 4-304 |
| Cow position: | chr23:23877398-23877702 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 9-244 |
| Cow position: | chr23:4771064-4771311 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 165 |
| Conread position: | 11-231 |
| Cow position: | chr23:19841094-19840868 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 11-263 |
| Cow position: | chr23:3202275-3202016 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 11-275 |
| Cow position: | chr23:6303811-6303542 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 24-251 |
| Cow position: | chr23:7523466-7523229 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 48-251 |
| Cow position: | chr23:3536139-3536350 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 49-296 |
| Cow position: | chr23:30589073-30589325 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 203 |
| Conread position: | 68-222 |
| Cow position: | chr23:20108082-20108242 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 68-307 |
| Cow position: | chr23:31756621-31756387 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 84-251 |
| Cow position: | chr23:33686585-33686417 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 147 |
| Conread position: | 94-275 |
| Cow position: | chr23:31086208-31086027 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 119, 145 |
| Conread position: | 122-307 |
| Cow position: | chr23:18394854-18395029 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.