Cow genome map


           Conread name:
           reye1618b_o19r1.y1
        

               Conread position:
               1-230
               

               Cow position:
               chr28:26920452-26920678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               1-274
               

               Cow position:
               chr28:6951828-6952095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 136
               

               Conread position:
               1-296
               

               Cow position:
               chr28:34846928-34847226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               1-307
               

               Cow position:
               chr28:29042212-29042506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               1-321
               

               Cow position:
               chr28:2052191-2051873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               3-251
               

               Cow position:
               chr28:5933295-5933051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               3-321
               

               Cow position:
               chr28:30126822-30126500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               11-275
               

               Cow position:
               chr28:19219967-19219686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               24-176
               

               Cow position:
               chr28:29048349-29048507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               24-307
               

               Cow position:
               chr28:28148298-28148011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               48-214
               

               Cow position:
               chr28:5703255-5703427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               63-291
               

               Cow position:
               chr28:4133116-4132890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 67
               
Show alignments to all cow chromosomes.