Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-164 |
| Cow position: | chr29:6744004-6743832 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-169 |
| Cow position: | chr29:24704319-24704145 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-203 |
| Cow position: | chr29:44023674-44023883 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 168 |
| Conread position: | 1-243 |
| Cow position: | chr29:5535548-5535799 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 1-271 |
| Cow position: | chr29:5531795-5532071 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 1-271 |
| Cow position: | chr29:30575916-30575642 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 1-276 |
| Cow position: | chr29:13500742-13500467 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-283 |
| Cow position: | chr29:1900693-1900416 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 1-290 |
| Cow position: | chr29:34090058-34090354 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 191 |
| Conread position: | 1-291 |
| Cow position: | chr29:32203905-32204204 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-307 |
| Cow position: | chr29:24140132-24140429 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 1-312 |
| Cow position: | chr29:24801864-24801546 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 253 |
| Conread position: | 1-314 |
| Cow position: | chr29:40632874-40632562 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-315 |
| Cow position: | chr29:29455904-29455587 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 1-321 |
| Cow position: | chr29:23133870-23134190 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 186 |
| Conread position: | 2-243 |
| Cow position: | chr29:24506704-24506963 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 2-269 |
| Cow position: | chr29:1773137-1772869 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 2-277 |
| Cow position: | chr29:1447188-1446906 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 2-296 |
| Cow position: | chr29:29128626-29128926 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 3-302 |
| Cow position: | chr29:30355703-30355994 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 3-316 |
| Cow position: | chr29:11360995-11360679 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 25, 188 |
| Conread position: | 5-152 |
| Cow position: | chr29:40442891-40442746 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 11-223 |
| Cow position: | chr29:18444989-18444776 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 24-276 |
| Cow position: | chr29:29637524-29637778 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 26-321 |
| Cow position: | chr29:20049669-20049961 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 223 |
| Conread position: | 39-189 |
| Cow position: | chr29:26524526-26524371 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 41-193 |
| Cow position: | chr29:42905014-42904858 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 48-251 |
| Cow position: | chr29:11973112-11973325 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 63-315 |
| Cow position: | chr29:21306793-21306542 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 63-320 |
| Cow position: | chr29:8849534-8849783 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 64-264 |
| Cow position: | chr29:3235478-3235671 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 78-190 |
| Cow position: | chr29:16431452-16431341 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 83-302 |
| Cow position: | chr29:5777563-5777339 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 164 |
| Conread position: | 84-224 |
| Cow position: | chr29:42909185-42909045 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 101 |
| Conread position: | 84-307 |
| Cow position: | chr29:32744819-32745037 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 143, 50 |
| Conread position: | 86-208 |
| Cow position: | chr29:2540930-2540808 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-247 |
| Cow position: | chr29:36004726-36004572 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 134-281 |
| Cow position: | chr29:40442609-40442462 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 121, 131 |
Show alignments to all cow chromosomes.