Cow genome map

Conread name: reye1618b_o19r1.y1

Conread position: 1-168
Cow position: chr3:4333113-4332940 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 47

Conread position: 1-185
Cow position: chr3:27524211-27524402 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 173

Conread position: 1-192
Cow position: chr3:32246509-32246310 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 46

Conread position: 1-214
Cow position: chr3:31110291-31110512 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 181

Conread position: 1-223
Cow position: chr3:63998158-63998386 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 48

Conread position: 1-225
Cow position: chr3:60787993-60788221 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 66

Conread position: 1-225
Cow position: chr3:79071122-79070890 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 38

Conread position: 1-225
Cow position: chr3:81222271-81222497 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 13

Conread position: 1-238
Cow position: chr3:11952215-11951970 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 116

Conread position: 1-242
Cow position: chr3:9233408-9233167 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 43

Conread position: 1-273
Cow position: chr3:14184451-14184172 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 78

Conread position: 1-274
Cow position: chr3:32578920-32578643 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 28

Conread position: 1-275
Cow position: chr3:8146950-8146663 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 251

Conread position: 1-275
Cow position: chr3:44090678-44090394 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 236

Conread position: 1-291
Cow position: chr3:6644810-6645112 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 211

Conread position: 1-291
Cow position: chr3:45936949-45937240 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 1-292
Cow position: chr3:65534932-65535212 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 46

Conread position: 1-307
Cow position: chr3:72884786-72885099 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 1-321
Cow position: chr3:14038913-14038605 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 1-321
Cow position: chr3:39403674-39403343 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 47

Conread position: 1-321
Cow position: chr3:79067196-79067519 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 2-273
Cow position: chr3:16574547-16574826 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 46

Conread position: 3-251
Cow position: chr3:83458921-83459178 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 134

Conread position: 5-274
Cow position: chr3:23178523-23178800 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 170

Conread position: 5-275
Cow position: chr3:52608825-52608550 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 39

Conread position: 7-221
Cow position: chr3:81505536-81505755 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 36

Conread position: 17-190
Cow position: chr3:75055839-75055655 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 19-213
Cow position: chr3:6769946-6769748 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 24

Conread position: 22-274
Cow position: chr3:28595702-28595445 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 146

Conread position: 42-223
Cow position: chr3:53211461-53211646 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 48-321
Cow position: chr3:79141972-79142249 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 209

Conread position: 50-307
Cow position: chr3:78096167-78096421 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 128

Conread position: 51-169
Cow position: chr3:67537635-67537515 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 12

Conread position: 63-246
Cow position: chr3:53210654-53210468 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 156

Conread position: 63-291
Cow position: chr3:3709594-3709381 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 86

Conread position: 63-291
Cow position: chr3:83606208-83605978 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 70

Conread position: 80-307
Cow position: chr3:22812350-22812128 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 104

Conread position: 84-217
Cow position: chr3:20063900-20064032 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 123, 97

Conread position: 84-232
Cow position: chr3:1902269-1902413 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 84-238
Cow position: chr3:6591624-6591777 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 90-276
Cow position: chr3:48970988-48970802 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 128

Conread position: 146-281
Cow position: chr3:2308582-2308713 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 157-274
Cow position: chr3:67537305-67537188 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.