Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-168 |
| Cow position: | chr6:51396039-51396214 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 1-169 |
| Cow position: | chr6:67981491-67981672 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-173 |
| Cow position: | chr6:45660046-45660219 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 1-190 |
| Cow position: | chr6:55972545-55972342 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-193 |
| Cow position: | chr6:18414131-18414332 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 1-197 |
| Cow position: | chr6:24186766-24186575 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 1-211 |
| Cow position: | chr6:26637821-26638035 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 1-211 |
| Cow position: | chr6:59218848-59218633 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 1-223 |
| Cow position: | chr6:35751321-35751551 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-265 |
| Cow position: | chr6:68263567-68263834 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-271 |
| Cow position: | chr6:16552084-16552365 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 1-273 |
| Cow position: | chr6:62583194-62582915 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 1-275 |
| Cow position: | chr6:417767-418050 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 1-275 |
| Cow position: | chr6:29838779-29838501 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 1-291 |
| Cow position: | chr6:55503332-55503033 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 1-306 |
| Cow position: | chr6:44757832-44758152 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 1-307 |
| Cow position: | chr6:1055732-1056032 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 1-307 |
| Cow position: | chr6:17291567-17291876 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-307 |
| Cow position: | chr6:61409959-61410267 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 1-307 |
| Cow position: | chr6:65706317-65706628 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 2-271 |
| Cow position: | chr6:44610227-44609952 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 183 |
| Conread position: | 2-281 |
| Cow position: | chr6:22817707-22817999 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 3-307 |
| Cow position: | chr6:68590837-68590528 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 3-321 |
| Cow position: | chr6:15264657-15264980 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 13-235 |
| Cow position: | chr6:4387587-4387357 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 24-282 |
| Cow position: | chr6:28440786-28440526 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 63-193 |
| Cow position: | chr6:63028912-63028778 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 63-299 |
| Cow position: | chr6:44232062-44232296 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 156 |
| Conread position: | 63-321 |
| Cow position: | chr6:20284704-20284451 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 64-214 |
| Cow position: | chr6:682080-681922 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 64-291 |
| Cow position: | chr6:68589734-68589493 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 65-321 |
| Cow position: | chr6:48211938-48212188 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 85-321 |
| Cow position: | chr6:34101617-34101844 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.