Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-171 |
| Cow position: | chr8:22754332-22754505 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 1-179 |
| Cow position: | chr8:23352707-23352518 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-202 |
| Cow position: | chr8:848695-848494 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 135 |
| Conread position: | 1-205 |
| Cow position: | chr8:39059865-39059654 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 170 |
| Conread position: | 1-214 |
| Cow position: | chr8:40114534-40114319 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 1-291 |
| Cow position: | chr8:24688184-24688479 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-291 |
| Cow position: | chr8:35558892-35558597 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 1-296 |
| Cow position: | chr8:45558678-45558970 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 1-307 |
| Cow position: | chr8:45409813-45410122 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-307 |
| Cow position: | chr8:49881984-49882284 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 1-316 |
| Cow position: | chr8:1649189-1649509 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 246 |
| Conread position: | 1-320 |
| Cow position: | chr8:1647845-1648155 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 1-320 |
| Cow position: | chr8:37441921-37441620 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-321 |
| Cow position: | chr8:1443065-1442744 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 1-321 |
| Cow position: | chr8:12210385-12210700 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 2-191 |
| Cow position: | chr8:57724365-57724558 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 2-230 |
| Cow position: | chr8:17705406-17705169 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 2-273 |
| Cow position: | chr8:9293011-9292738 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 2-273 |
| Cow position: | chr8:36771768-36772028 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 3-274 |
| Cow position: | chr8:25386712-25386438 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 6-273 |
| Cow position: | chr8:49987039-49987318 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 11-223 |
| Cow position: | chr8:48454773-48454995 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 11-259 |
| Cow position: | chr8:17430914-17430662 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 24-218 |
| Cow position: | chr8:25797722-25797522 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 24-275 |
| Cow position: | chr8:33160939-33160684 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 198 |
| Conread position: | 25-190 |
| Cow position: | chr8:48674220-48674050 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 28-251 |
| Cow position: | chr8:22039852-22040083 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 63-193 |
| Cow position: | chr8:4060268-4060403 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 63-244 |
| Cow position: | chr8:1653847-1653664 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 84-320 |
| Cow position: | chr8:15786271-15786036 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 86-307 |
| Cow position: | chr8:8550405-8550200 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 73 |
Show alignments to all cow chromosomes.