Cow genome map
| Conread name: | reye1618b_o19r1.y1 |
| Conread position: | 1-141 |
| Cow position: | chrX:42549777-42549630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-193 |
| Cow position: | chrX:48390108-48389906 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 1-243 |
| Cow position: | chrX:32568476-32568731 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 26, 192 |
| Conread position: | 1-271 |
| Cow position: | chrX:29774671-29774394 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 1-274 |
| Cow position: | chrX:13259251-13259532 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 1-291 |
| Cow position: | chrX:29901360-29901070 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 1-305 |
| Cow position: | chrX:31465956-31466250 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 68, 107 |
| Conread position: | 1-321 |
| Cow position: | chrX:42559358-42559680 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 2-148 |
| Cow position: | chrX:32651000-32651151 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 2-163 |
| Cow position: | chrX:38139058-38139228 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 2-193 |
| Cow position: | chrX:11810163-11810364 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 2-271 |
| Cow position: | chrX:23364263-23364534 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 2-321 |
| Cow position: | chrX:42066459-42066140 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 3-269 |
| Cow position: | chrX:41930058-41929771 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 3-321 |
| Cow position: | chrX:42558379-42558062 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 4-321 |
| Cow position: | chrX:11840709-11841028 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 5-279 |
| Cow position: | chrX:44191710-44191999 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 6-306 |
| Cow position: | chrX:802914-802633 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 8-171 |
| Cow position: | chrX:33782999-33782833 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 9-225 |
| Cow position: | chrX:25441879-25442104 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 17-222 |
| Cow position: | chrX:31919121-31919334 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 19-190 |
| Cow position: | chrX:31908923-31909099 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 39-213 |
| Cow position: | chrX:31443902-31443723 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 50-302 |
| Cow position: | chrX:34863343-34863593 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 198 |
| Conread position: | 71-274 |
| Cow position: | chrX:38737319-38737524 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 170 |
| Conread position: | 86-214 |
| Cow position: | chrX:17482988-17483115 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 139-305 |
| Cow position: | chrX:39427745-39427903 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 55 |
| Conread position: | 167-307 |
| Cow position: | chrX:39404156-39404018 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 30 |
Show alignments to all cow chromosomes.