Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-134 |
| Cow position: | chr1:101012906-101013051 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-150 |
| Cow position: | chr1:69416719-69416879 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-150 |
| Cow position: | chr1:101794833-101794683 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 6 |
| Conread position: | 1-151 |
| Cow position: | chr1:86508346-86508508 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-152 |
| Cow position: | chr1:82565675-82565513 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-155 |
| Cow position: | chr1:27187855-27187698 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 1-171 |
| Cow position: | chr1:89768979-89769161 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 1-189 |
| Cow position: | chr1:29035862-29035661 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-194 |
| Cow position: | chr1:90607316-90607525 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-202 |
| Cow position: | chr1:29976026-29976228 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 50 |
| Conread position: | 1-215 |
| Cow position: | chr1:23092197-23091986 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 1-215 |
| Cow position: | chr1:76095505-76095730 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-219 |
| Cow position: | chr1:50210280-50210516 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-229 |
| Cow position: | chr1:10724143-10723895 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 1-233 |
| Cow position: | chr1:45018079-45018327 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 1-236 |
| Cow position: | chr1:67316354-67316124 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 1-237 |
| Cow position: | chr1:49972611-49972855 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 1-247 |
| Cow position: | chr1:9378956-9379221 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-254 |
| Cow position: | chr1:17035032-17035307 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-254 |
| Cow position: | chr1:67002717-67002446 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 1-254 |
| Cow position: | chr1:81862422-81862691 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-264 |
| Cow position: | chr1:59207517-59207797 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 1-266 |
| Cow position: | chr1:87969877-87969598 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 1-271 |
| Cow position: | chr1:26584662-26584369 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-271 |
| Cow position: | chr1:85531796-85532090 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 215 |
| Conread position: | 1-274 |
| Cow position: | chr1:76702746-76703023 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 1-277 |
| Cow position: | chr1:13581426-13581724 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 249 |
| Conread position: | 1-278 |
| Cow position: | chr1:38420216-38419934 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 1-279 |
| Cow position: | chr1:4209770-4209467 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr1:31359949-31359666 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 1-279 |
| Cow position: | chr1:77923270-77922966 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-279 |
| Cow position: | chr1:78923783-78923489 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 1-279 |
| Cow position: | chr1:88387789-88387516 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 1-279 |
| Cow position: | chr1:98658359-98658648 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 1-280 |
| Cow position: | chr1:31416946-31417244 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 1-281 |
| Cow position: | chr1:5356690-5356385 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-281 |
| Cow position: | chr1:20830457-20830150 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-281 |
| Cow position: | chr1:29363857-29363557 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 267 |
| Conread position: | 1-281 |
| Cow position: | chr1:53200107-53199802 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-281 |
| Cow position: | chr1:55275468-55275774 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-282 |
| Cow position: | chr1:18240662-18240960 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 205 |
| Conread position: | 1-282 |
| Cow position: | chr1:24442799-24443105 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-282 |
| Cow position: | chr1:33713633-33713327 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-283 |
| Cow position: | chr1:17940208-17940517 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 269 |
| Conread position: | 1-283 |
| Cow position: | chr1:40511459-40511760 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 267 |
| Conread position: | 1-284 |
| Cow position: | chr1:21088993-21088687 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 1-284 |
| Cow position: | chr1:24652825-24652534 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 1-284 |
| Cow position: | chr1:31364541-31364842 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 1-284 |
| Cow position: | chr1:40575762-40575466 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 24, 258 |
| Conread position: | 1-284 |
| Cow position: | chr1:53365108-53364822 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 1-284 |
| Cow position: | chr1:67833572-67833875 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 1-284 |
| Cow position: | chr1:67910109-67909799 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr1:69768142-69767834 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr1:82911592-82911899 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 202 |
| Conread position: | 1-284 |
| Cow position: | chr1:85793243-85792935 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr1:89482379-89482086 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 1-285 |
| Cow position: | chr1:57696608-57696905 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 1-285 |
| Cow position: | chr1:91891557-91891866 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-288 |
| Cow position: | chr1:22619109-22619402 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 1-291 |
| Cow position: | chr1:71561183-71561494 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-291 |
| Cow position: | chr1:80445713-80445401 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 303 |
| Conread position: | 1-294 |
| Cow position: | chr1:33897822-33897506 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 307 |
| Conread position: | 1-294 |
| Cow position: | chr1:81288697-81288381 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 304 |
| Conread position: | 1-294 |
| Cow position: | chr1:86546575-86546889 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 251 |
| Conread position: | 1-295 |
| Cow position: | chr1:89494652-89494966 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 1-299 |
| Cow position: | chr1:57423270-57423593 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-302 |
| Cow position: | chr1:56724706-56724390 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 1-303 |
| Cow position: | chr1:9260047-9259722 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 307 |
| Conread position: | 1-303 |
| Cow position: | chr1:20526041-20525716 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 250 |
| Conread position: | 1-303 |
| Cow position: | chr1:33852831-33852515 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 265 |
| Conread position: | 1-303 |
| Cow position: | chr1:39545349-39545025 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 24, 303 |
| Conread position: | 1-303 |
| Cow position: | chr1:79635433-79635749 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 301 |
| Conread position: | 1-303 |
| Cow position: | chr1:82477538-82477213 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 307 |
| Conread position: | 1-303 |
| Cow position: | chr1:82654219-82653902 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 263 |
| Conread position: | 1-303 |
| Cow position: | chr1:86594932-86595255 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 1-317 |
| Cow position: | chr1:61590638-61590960 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 2-275 |
| Cow position: | chr1:29039591-29039306 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 2-280 |
| Cow position: | chr1:34694249-34693943 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 287 |
| Conread position: | 2-280 |
| Cow position: | chr1:40056665-40056361 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-284 |
| Cow position: | chr1:80357609-80357920 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 270 |
| Conread position: | 2-313 |
| Cow position: | chr1:91900583-91900253 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 302 |
| Conread position: | 3-208 |
| Cow position: | chr1:21116281-21116496 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 4-197 |
| Cow position: | chr1:77115114-77115309 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 4-283 |
| Cow position: | chr1:38417690-38417394 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 200 |
| Conread position: | 4-303 |
| Cow position: | chr1:56165095-56164787 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 6-252 |
| Cow position: | chr1:55320516-55320778 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 6-271 |
| Cow position: | chr1:18026203-18026480 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 204 |
| Conread position: | 7-166 |
| Cow position: | chr1:48248468-48248305 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 7-221 |
| Cow position: | chr1:52357703-52357922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 7-241 |
| Cow position: | chr1:74285123-74285372 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-249 |
| Cow position: | chr1:30074424-30074167 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 7-278 |
| Cow position: | chr1:18193453-18193155 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-279 |
| Cow position: | chr1:57658451-57658149 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-282 |
| Cow position: | chr1:85778899-85779186 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 7-284 |
| Cow position: | chr1:3933701-3934002 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:5503520-5503224 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:8826610-8826301 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:12060650-12060957 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 266 |
| Conread position: | 7-284 |
| Cow position: | chr1:25551520-25551218 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 7-284 |
| Cow position: | chr1:28874623-28874333 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 7-284 |
| Cow position: | chr1:32566368-32566669 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 18, 205 |
| Conread position: | 7-284 |
| Cow position: | chr1:42737986-42737702 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr1:55778143-55777833 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 7-284 |
| Cow position: | chr1:56192608-56192908 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:62243097-62243399 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:62804619-62804915 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 234 |
| Conread position: | 7-284 |
| Cow position: | chr1:63604215-63604516 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 246 |
| Conread position: | 7-284 |
| Cow position: | chr1:65387868-65387576 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr1:69404556-69404261 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr1:72082313-72082032 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 7-284 |
| Cow position: | chr1:72985026-72984737 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 7-284 |
| Cow position: | chr1:73069502-73069812 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:76619923-76620207 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 7-284 |
| Cow position: | chr1:76750416-76750711 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 7-284 |
| Cow position: | chr1:79455397-79455698 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 18, 196 |
| Conread position: | 7-284 |
| Cow position: | chr1:82922607-82922897 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 7-284 |
| Cow position: | chr1:88132332-88132030 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:93856070-93855773 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr1:94661225-94660930 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 145 |
| Conread position: | 7-284 |
| Cow position: | chr1:99914997-99914682 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-295 |
| Cow position: | chr1:68605991-68606301 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 301 |
| Conread position: | 7-295 |
| Cow position: | chr1:72185324-72185635 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 302 |
| Conread position: | 7-299 |
| Cow position: | chr1:40683186-40683501 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-303 |
| Cow position: | chr1:17011179-17011495 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 295 |
| Conread position: | 9-220 |
| Cow position: | chr1:21997863-21998091 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 9-266 |
| Cow position: | chr1:41519222-41519495 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 9-281 |
| Cow position: | chr1:72038017-72038306 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 170 |
| Conread position: | 9-284 |
| Cow position: | chr1:30533470-30533765 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 9-284 |
| Cow position: | chr1:56142790-56143079 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 255 |
| Conread position: | 10-262 |
| Cow position: | chr1:77110537-77110792 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 10-287 |
| Cow position: | chr1:73197482-73197769 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 19-229 |
| Cow position: | chr1:50248157-50248388 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 19-270 |
| Cow position: | chr1:57364805-57365065 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 190 |
| Conread position: | 19-284 |
| Cow position: | chr1:26517348-26517631 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 229 |
| Conread position: | 19-284 |
| Cow position: | chr1:33552470-33552183 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 20-224 |
| Cow position: | chr1:22345538-22345329 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 20-306 |
| Cow position: | chr1:3384418-3384714 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 22-266 |
| Cow position: | chr1:30063904-30063630 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 25-270 |
| Cow position: | chr1:81840949-81841198 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 25-273 |
| Cow position: | chr1:15474398-15474651 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 190, 28 |
| Conread position: | 25-285 |
| Cow position: | chr1:29412645-29412902 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 26-190 |
| Cow position: | chr1:61541826-61541656 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 26-283 |
| Cow position: | chr1:81777955-81777680 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 27-285 |
| Cow position: | chr1:99315753-99315496 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 28-211 |
| Cow position: | chr1:91079364-91079555 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 28-266 |
| Cow position: | chr1:41781787-41782043 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 28-269 |
| Cow position: | chr1:91446974-91446729 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 29-288 |
| Cow position: | chr1:58177601-58177865 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 30-323 |
| Cow position: | chr1:43569895-43570197 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 31-277 |
| Cow position: | chr1:13876728-13876982 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 46-291 |
| Cow position: | chr1:81927144-81927392 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 140 |
| Conread position: | 53-281 |
| Cow position: | chr1:89430372-89430129 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 58-277 |
| Cow position: | chr1:47162142-47162369 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 73-270 |
| Cow position: | chr1:29607793-29608007 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 93-279 |
| Cow position: | chr1:30520056-30519857 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 16, 186 |
| Conread position: | 99-278 |
| Cow position: | chr1:11859795-11859983 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 6, 118 |
| Conread position: | 109-284 |
| Cow position: | chr1:58338410-58338214 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 112-271 |
| Cow position: | chr1:58199650-58199811 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 45, 36 |
Show alignments to all cow chromosomes.