Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-136
Cow position: chr10:36512164-36512020 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-192
Cow position: chr10:22346544-22346336 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-202
Cow position: chr10:58376724-58376930 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 136

Conread position: 1-249
Cow position: chr10:53485650-53485912 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 66

Conread position: 1-254
Cow position: chr10:29722470-29722729 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 162

Conread position: 1-270
Cow position: chr10:21884361-21884082 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 101

Conread position: 1-270
Cow position: chr10:42642154-42641884 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 149

Conread position: 1-270
Cow position: chr10:68160053-68160346 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 143

Conread position: 1-279
Cow position: chr10:25651845-25652148 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position: chr10:28643124-28642818 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position: chr10:29011084-29011371 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 117

Conread position: 1-279
Cow position: chr10:40641531-40641243 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 54

Conread position: 1-281
Cow position: chr10:19841263-19840962 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position: chr10:21739171-21739468 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 133

Conread position: 1-281
Cow position: chr10:47788258-47787968 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 1-281
Cow position: chr10:57555751-57556056 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position: chr10:20369526-20369796 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 22

Conread position: 1-282
Cow position: chr10:29631219-29631520 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 1-283
Cow position: chr10:54930631-54930926 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 55

Conread position: 1-284
Cow position: chr10:19494705-19495012 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr10:20375261-20375555 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-284
Cow position: chr10:29109402-29109692 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 1-284
Cow position: chr10:38849851-38849566 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 45

Conread position: 1-284
Cow position: chr10:41878508-41878199 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr10:50136148-50135849 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-284
Cow position: chr10:55094850-55094546 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 136

Conread position: 1-288
Cow position: chr10:20382451-20382747 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-289
Cow position: chr10:31525320-31525040 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 86

Conread position: 1-294
Cow position: chr10:10583706-10583385 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 309

Conread position: 1-299
Cow position: chr10:7896897-7897221 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-303
Cow position: chr10:14805430-14805105 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-303
Cow position: chr10:21399099-21399419 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 267

Conread position: 1-303
Cow position: chr10:39181380-39181055 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 304

Conread position: 1-303
Cow position: chr10:39814814-39815139 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 267

Conread position: 1-303
Cow position: chr10:41158997-41158706 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 106

Conread position: 1-314
Cow position: chr10:44708026-44708363 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 308

Conread position: 1-323
Cow position: chr10:33870869-33870523 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 2-247
Cow position: chr10:10172318-10172050 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 2-274
Cow position: chr10:58812180-58812459 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 90

Conread position: 2-284
Cow position: chr10:28947051-28946759 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 2-299
Cow position: chr10:60361468-60361159 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 14

Conread position: 3-216
Cow position: chr10:21517396-21517614 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 160

Conread position: 3-220
Cow position: chr10:46196633-46196421 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 61

Conread position: 3-279
Cow position: chr10:57502381-57502091 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 51

Conread position: 3-284
Cow position: chr10:41568683-41568377 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-285
Cow position: chr10:40398570-40398273 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 213

Conread position: 4-303
Cow position: chr10:28255835-28256157 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 21, 301

Conread position: 5-294
Cow position: chr10:53320819-53321126 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 51

Conread position: 6-284
Cow position: chr10:47908518-47908210 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 7-193
Cow position: chr10:39439730-39439535 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 178

Conread position: 7-248
Cow position: chr10:8291624-8291372 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 62

Conread position: 7-257
Cow position: chr10:2119433-2119684 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 47

Conread position: 7-282
Cow position: chr10:39039728-39040017 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 41

Conread position: 7-284
Cow position: chr10:126863-126563 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr10:1379074-1378776 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position: chr10:7280527-7280826 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr10:21488534-21488242 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 7-284
Cow position: chr10:22102812-22102513 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 49

Conread position: 7-284
Cow position: chr10:37771462-37771162 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position: chr10:38343788-38344083 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 47

Conread position: 7-284
Cow position: chr10:39778553-39778839 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 40

Conread position: 7-284
Cow position: chr10:57988418-57988718 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 9-197
Cow position: chr10:38535400-38535585 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 89

Conread position: 9-247
Cow position: chr10:16927245-16926997 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 182

Conread position: 9-282
Cow position: chr10:62407206-62407499 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 47

Conread position: 9-283
Cow position: chr10:29845083-29845368 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 77, 14

Conread position: 9-284
Cow position: chr10:30683915-30684216 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 11-281
Cow position: chr10:16478313-16478040 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 34

Conread position: 13-274
Cow position: chr10:48397536-48397805 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 160

Conread position: 16-284
Cow position: chr10:55285507-55285238 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 80

Conread position: 17-284
Cow position: chr10:40150701-40150976 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 140

Conread position: 19-270
Cow position: chr10:11822312-11822037 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 19-284
Cow position: chr10:14334271-14334569 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 19-303
Cow position: chr10:11684065-11684372 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 286

Conread position: 20-284
Cow position: chr10:14843327-14843057 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 125

Conread position: 20-284
Cow position: chr10:19513142-19512857 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 20-284
Cow position: chr10:21079178-21078901 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 146

Conread position: 20-294
Cow position: chr10:24310824-24311092 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 43

Conread position: 22-297
Cow position: chr10:14863216-14862935 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 25-254
Cow position: chr10:14853408-14853177 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 28

Conread position: 25-273
Cow position: chr10:29101168-29101430 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 195

Conread position: 25-279
Cow position: chr10:51781855-51782133 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 26-277
Cow position: chr10:36468910-36469168 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 19

Conread position: 42-285
Cow position: chr10:64220891-64221132 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 24

Conread position: 47-279
Cow position: chr10:42111952-42111701 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 59-279
Cow position: chr10:64146447-64146211 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 106

Conread position: 64-284
Cow position: chr10:6538910-6538663 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 73-284
Cow position: chr10:32702230-32702004 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 86-303
Cow position: chr10:1665042-1665272 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 212

Conread position: 95-282
Cow position: chr10:38544456-38544647 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 37

Conread position: 116-279
Cow position: chr10:27663808-27663985 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 116-281
Cow position: chr10:17433805-17433636 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 23

Conread position: 118-284
Cow position: chr10:29109699-29109866 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 133

Show alignments to all cow chromosomes.