Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-183
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 180

Conread position: 1-192
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 43

Conread position: 1-193
Cow position:
Alignm length: 204
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-242
Cow position:
Alignm length: 267
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 210

Conread position: 1-247
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 130

Conread position: 1-253
Cow position:
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 1-254
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 87

Conread position: 1-262
Cow position:
Alignm length: 277
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 267

Conread position: 1-263
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 47

Conread position: 1-264
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 72

Conread position: 1-273
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 77

Conread position: 1-276
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 67

Conread position: 1-278
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 55

Conread position: 1-278
Cow position:
Alignm length: 288
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 108, 44

Conread position: 1-279
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 78

Conread position: 1-279
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 162

Conread position: 1-279
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 93, 44

Conread position: 1-280
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 67

Conread position: 1-281
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 93, 44

Conread position: 1-281
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position:
Alignm length: 296
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 38

Conread position: 1-284
Cow position:
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 291

Conread position: 1-284
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Conread position: 1-284
Cow position:
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 127

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 185

Conread position: 1-299
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position:
Alignm length: 327
Alignm identity: 242
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 24, 55

Conread position: 1-303
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-303
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 12

Conread position: 1-313
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 2-284
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 285

Conread position: 3-233
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 69, 238

Conread position: 4-281
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 5-279
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 70

Conread position: 6-233
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 17

Conread position: 6-282
Cow position:
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 211

Conread position: 6-286
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 41

Conread position: 7-160
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 7-282
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 38

Conread position: 7-283
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 7-283
Cow position:
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 206

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 306
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 244

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 142

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 207

Conread position: 7-284
Cow position:
Alignm length: 306
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 7-285
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 196

Conread position: 7-323
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 130

Conread position: 8-253
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 189

Conread position: 8-284
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 9-284
Cow position:
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 10-314
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 44

Conread position: 13-270
Cow position:
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 13-280
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 139

Conread position: 13-281
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 54

Conread position: 13-284
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 13-288
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 41

Conread position: 13-295
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 224

Conread position: 16-244
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 12

Conread position: 19-265
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 176

Conread position: 19-284
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 19-294
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 132

Conread position: 19-303
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 103

Conread position: 20-279
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 37

Conread position: 20-323
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 70

Conread position: 21-236
Cow position:
Alignm length: 234
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 40, 8

Conread position: 22-269
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 22-270
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 116

Conread position: 23-284
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 19

Conread position: 24-295
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 133

Conread position: 25-273
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 12

Conread position: 26-270
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 130

Conread position: 39-266
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 11

Conread position: 41-303
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 164

Conread position: 60-271
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 130

Conread position: 68-284
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 143

Conread position: 75-322
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 18

Conread position: 78-295
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 81-247
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 140

Conread position: 90-284
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 93-244
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 94-223
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 54

Conread position: 108-251
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 144

Conread position: 115-279
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 124

Conread position: 120-323
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 49

Conread position: 156-302
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 15

Show alignments to all cow chromosomes.