Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-174 |
| Cow position: | chr12:17967320-17967137 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-191 |
| Cow position: | chr12:24994452-24994658 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-251 |
| Cow position: | chr12:34174628-34174357 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-253 |
| Cow position: | chr12:33119674-33119405 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 1-254 |
| Cow position: | chr12:24433574-24433847 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 1-276 |
| Cow position: | chr12:19870399-19870122 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 95, 22 |
| Conread position: | 1-279 |
| Cow position: | chr12:24977327-24977606 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 1-281 |
| Cow position: | chr12:21429519-21429214 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-282 |
| Cow position: | chr12:14660839-14661144 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-284 |
| Cow position: | chr12:1776452-1776763 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-284 |
| Cow position: | chr12:1888048-1888356 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr12:21943254-21942945 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 156 |
| Conread position: | 1-284 |
| Cow position: | chr12:32655062-32654751 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 1-284 |
| Cow position: | chr12:35346041-35345753 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 1-285 |
| Cow position: | chr12:18465416-18465150 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 1-286 |
| Cow position: | chr12:21210175-21209864 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-295 |
| Cow position: | chr12:48471376-48471684 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 281 |
| Conread position: | 1-296 |
| Cow position: | chr12:28005389-28005096 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 156, 63 |
| Conread position: | 1-305 |
| Cow position: | chr12:32677484-32677793 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 1-309 |
| Cow position: | chr12:37560524-37560190 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 310 |
| Conread position: | 2-284 |
| Cow position: | chr12:20844101-20843821 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 2-290 |
| Cow position: | chr12:20996576-20996883 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 298 |
| Conread position: | 4-282 |
| Cow position: | chr12:21482618-21482330 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 7-179 |
| Cow position: | chr12:21092222-21092392 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 7-269 |
| Cow position: | chr12:22204207-22204493 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 283 |
| Conread position: | 7-283 |
| Cow position: | chr12:27854460-27854759 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr12:6405131-6405438 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-284 |
| Cow position: | chr12:8676585-8676895 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 160 |
| Conread position: | 7-284 |
| Cow position: | chr12:11099731-11099426 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-284 |
| Cow position: | chr12:27931404-27931700 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-289 |
| Cow position: | chr12:1404006-1403691 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 9-284 |
| Cow position: | chr12:25099566-25099869 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 9-284 |
| Cow position: | chr12:42858033-42858333 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 13-283 |
| Cow position: | chr12:599874-600161 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 19-284 |
| Cow position: | chr12:21199479-21199194 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 19-294 |
| Cow position: | chr12:17980196-17979917 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 72, 118 |
| Conread position: | 22-279 |
| Cow position: | chr12:8138659-8138908 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 24-278 |
| Cow position: | chr12:3362427-3362149 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 35-279 |
| Cow position: | chr12:31202014-31202280 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 37-280 |
| Cow position: | chr12:3209416-3209162 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 126 |
| Conread position: | 38-200 |
| Cow position: | chr12:20461948-20461779 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 52-284 |
| Cow position: | chr12:349855-349606 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 59-305 |
| Cow position: | chr12:21128544-21128307 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 91-279 |
| Cow position: | chr12:21386832-21387034 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 97-303 |
| Cow position: | chr12:42606864-42607079 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 197 |
| Conread position: | 113-284 |
| Cow position: | chr12:11581193-11581017 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 144-303 |
| Cow position: | chr12:21253259-21253426 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 149 |
Show alignments to all cow chromosomes.