Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-155
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 52, 17

Conread position: 1-185
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 1-194
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 192

Conread position: 1-200
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 134

Conread position: 1-213
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 144

Conread position: 1-243
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 210

Conread position: 1-247
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 1-278
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 239

Conread position: 1-279
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 52

Conread position: 1-279
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 160

Conread position: 1-280
Cow position:
Alignm length: 298
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 56

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 136

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 77

Conread position: 1-282
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 40

Conread position: 1-283
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 24, 73

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 196

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 77

Conread position: 1-284
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 1-284
Cow position:
Alignm length: 298
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-285
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-286
Cow position:
Alignm length: 297
Alignm identity: 204
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 265

Conread position: 1-289
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 262

Conread position: 1-295
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 77

Conread position: 1-303
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 1-303
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 68

Conread position: 1-313
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 307

Conread position: 2-164
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 59

Conread position: 2-286
Cow position:
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 4-254
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 47

Conread position: 4-276
Cow position:
Alignm length: 289
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 257

Conread position: 4-279
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 7-194
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 192

Conread position: 7-282
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 124

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 7-294
Cow position:
Alignm length: 306
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 7-302
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 48

Conread position: 8-284
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 9-289
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 19-270
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 36

Conread position: 20-284
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 266

Conread position: 22-284
Cow position:
Alignm length: 278
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 24

Conread position: 24-284
Cow position:
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 26-276
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 19

Conread position: 27-254
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 31

Conread position: 31-294
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 23

Conread position: 37-284
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 46-278
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 18

Conread position: 53-278
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 65-284
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 122-295
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 8

Show alignments to all cow chromosomes.