Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-200
Cow position: chr14:2287433-2287218 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 1-225
Cow position: chr14:13322500-13322722 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 132

Conread position: 1-233
Cow position: chr14:18417668-18417421 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 101, 245

Conread position: 1-234
Cow position: chr14:45163415-45163167 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 94

Conread position: 1-234
Cow position: chr14:47643456-47643213 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 145

Conread position: 1-247
Cow position: chr14:30583432-30583695 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 206

Conread position: 1-254
Cow position: chr14:45027835-45028117 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 75

Conread position: 1-254
Cow position: chr14:45207448-45207188 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 158

Conread position: 1-266
Cow position: chr14:45677921-45678201 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 28

Conread position: 1-272
Cow position: chr14:12611576-12611301 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 134

Conread position: 1-278
Cow position: chr14:10148041-10147739 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-278
Cow position: chr14:12124016-12124318 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 1-279
Cow position: chr14:25365326-25365623 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 25

Conread position: 1-279
Cow position: chr14:45670869-45671182 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position: chr14:29046506-29046822 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position: chr14:13579551-13579255 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 1-282
Cow position: chr14:43559403-43559097 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 1-284
Cow position: chr14:2295436-2295148 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 167

Conread position: 1-284
Cow position: chr14:13862931-13863236 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr14:17759731-17760020 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 1-284
Cow position: chr14:35384663-35384954 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 1-284
Cow position: chr14:37454780-37455053 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 45

Conread position: 1-284
Cow position: chr14:38148156-38147864 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 66

Conread position: 1-284
Cow position: chr14:44227543-44227235 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 1-284
Cow position: chr14:44290230-44289927 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr14:44690231-44689930 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 22

Conread position: 1-284
Cow position: chr14:44774884-44775179 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 1-284
Cow position: chr14:46466827-46466543 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 1-284
Cow position: chr14:48826441-48826146 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 120

Conread position: 1-294
Cow position: chr14:1659621-1659307 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 1-294
Cow position: chr14:40342223-40341909 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 1-295
Cow position: chr14:45710562-45710873 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 302

Conread position: 1-303
Cow position: chr14:9046746-9046420 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position: chr14:23256195-23256512 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 178

Conread position: 1-303
Cow position: chr14:27978522-27978203 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 2-254
Cow position: chr14:24996436-24996700 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 31

Conread position: 2-275
Cow position: chr14:44553004-44552717 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 146

Conread position: 2-278
Cow position: chr14:44255605-44255891 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 2-286
Cow position: chr14:27990454-27990744 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 2-286
Cow position: chr14:33678228-33677927 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 204

Conread position: 2-291
Cow position: chr14:45188643-45188942 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 165

Conread position: 3-281
Cow position: chr14:751731-751428 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-254
Cow position: chr14:23932753-23932493 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 139

Conread position: 4-279
Cow position: chr14:33402846-33402556 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 210

Conread position: 4-284
Cow position: chr14:48601186-48601478 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 49

Conread position: 7-279
Cow position: chr14:13780112-13779810 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 7-279
Cow position: chr14:17687657-17687361 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 121

Conread position: 7-284
Cow position: chr14:5530218-5529921 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 151

Conread position: 7-284
Cow position: chr14:11152992-11153292 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 7-284
Cow position: chr14:13304113-13303818 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 208

Conread position: 7-284
Cow position: chr14:16272135-16272434 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr14:16999897-17000198 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position: chr14:19327102-19327402 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position: chr14:20783628-20783315 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr14:22030289-22030585 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position: chr14:45086384-45086101 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 62

Conread position: 7-284
Cow position: chr14:46391384-46391671 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 12

Conread position: 7-284
Cow position: chr14:48253157-48253454 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 51

Conread position: 7-284
Cow position: chr14:50111964-50111654 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 7-285
Cow position: chr14:13274766-13274468 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 171

Conread position: 7-285
Cow position: chr14:50139726-50139425 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-289
Cow position: chr14:7473512-7473206 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 302

Conread position: 7-290
Cow position: chr14:5514090-5513792 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 31

Conread position: 7-294
Cow position: chr14:191205-190896 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 18, 297

Conread position: 7-294
Cow position: chr14:15274678-15274998 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 312

Conread position: 7-295
Cow position: chr14:45082215-45081905 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 301

Conread position: 8-284
Cow position: chr14:32448115-32447822 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 48

Conread position: 9-284
Cow position: chr14:30595194-30595509 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 196

Conread position: 16-285
Cow position: chr14:5075101-5074812 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 179

Conread position: 18-284
Cow position: chr14:16918569-16918858 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 19-244
Cow position: chr14:31882604-31882360 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 19-279
Cow position: chr14:21745230-21744965 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 143, 82

Conread position: 19-284
Cow position: chr14:44292354-44292072 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 21-294
Cow position: chr14:40168596-40168880 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 183

Conread position: 22-294
Cow position: chr14:29774952-29775224 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 106

Conread position: 22-317
Cow position: chr14:30666618-30666300 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 210

Conread position: 23-268
Cow position: chr14:13834285-13834024 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 239

Conread position: 25-270
Cow position: chr14:18105564-18105317 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 28

Conread position: 29-271
Cow position: chr14:2951439-2951687 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 120

Conread position: 59-282
Cow position: chr14:30736274-30736033 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 64-266
Cow position: chr14:28244577-28244794 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 29, 124

Conread position: 77-284
Cow position: chr14:13462607-13462379 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 100-279
Cow position: chr14:25693002-25692814 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 39

Conread position: 100-303
Cow position: chr14:17490400-17490616 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 198

Conread position: 108-299
Cow position: chr14:46637596-46637396 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 151

Conread position: 117-284
Cow position: chr14:13620102-13620281 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 138

Conread position: 134-284
Cow position: chr14:12742049-12742208 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 136-295
Cow position: chr14:12900113-12899947 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 116

Show alignments to all cow chromosomes.