Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-135
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-154
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 63

Conread position: 1-155
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-155
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-155
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-164
Cow position:
Alignm length: 170
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 1-174
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-193
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1-219
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 19

Conread position: 1-232
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 44

Conread position: 1-242
Cow position:
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 210

Conread position: 1-247
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 73

Conread position: 1-247
Cow position:
Alignm length: 274
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 230

Conread position: 1-265
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 55

Conread position: 1-266
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 62

Conread position: 1-270
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 27

Conread position: 1-270
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 1-271
Cow position:
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 130

Conread position: 1-280
Cow position:
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 1-281
Cow position:
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 208

Conread position: 1-284
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 12, 67

Conread position: 1-284
Cow position:
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 68

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 52

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 154

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 203

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 68

Conread position: 1-285
Cow position:
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-286
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 86

Conread position: 1-296
Cow position:
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-303
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-310
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 269

Conread position: 1-310
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 96

Conread position: 1-323
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 63

Conread position: 2-176
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 2-284
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 2-284
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 74

Conread position: 2-284
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 2-289
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 81

Conread position: 2-294
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 298

Conread position: 2-311
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 306

Conread position: 3-221
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 75

Conread position: 3-276
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 218

Conread position: 3-279
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 3-284
Cow position:
Alignm length: 301
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 4-235
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 41

Conread position: 4-279
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 4-284
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 4-285
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 149

Conread position: 4-288
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 6-278
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 97

Conread position: 6-284
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 7-135
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 7-157
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 128

Conread position: 7-215
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 188

Conread position: 7-228
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 63

Conread position: 7-252
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 7-252
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 7-281
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 62

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 201

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 193

Conread position: 7-284
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 288

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 22

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 51

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 45

Conread position: 7-284
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 7-285
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 7-285
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 120

Conread position: 7-288
Cow position:
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-290
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 130

Conread position: 7-294
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 234

Conread position: 7-295
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 50

Conread position: 7-295
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 69

Conread position: 9-276
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 27

Conread position: 9-284
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 26

Conread position: 9-284
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 9-284
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 9-284
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 49, 114

Conread position: 13-286
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 110

Conread position: 14-270
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 71

Conread position: 16-254
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 105

Conread position: 16-279
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 20

Conread position: 19-185
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 48

Conread position: 19-254
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 19-284
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 32

Conread position: 19-284
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 19-284
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 283

Conread position: 20-277
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 141

Conread position: 20-295
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 284

Conread position: 23-269
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 14

Conread position: 24-313
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 282

Conread position: 26-270
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 68

Conread position: 30-278
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 30

Conread position: 32-270
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 29

Conread position: 39-299
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 70, 60

Conread position: 49-284
Cow position:
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 52-284
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 64-294
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 22

Conread position: 76-284
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 183

Conread position: 80-294
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 58

Conread position: 90-284
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 95-284
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 108-238
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 146-284
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 11

Conread position: 156-284
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 156-284
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 42

Show alignments to all cow chromosomes.