Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-128
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-193
Cow position:
Alignm length: 210
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-194
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 1-220
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 159

Conread position: 1-224
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 132

Conread position: 1-224
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 47

Conread position: 1-247
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 46

Conread position: 1-254
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 18, 30

Conread position: 1-254
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 247

Conread position: 1-254
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-275
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 1-279
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 131

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 269

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 1-285
Cow position:
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-292
Cow position:
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 212

Conread position: 1-295
Cow position:
Alignm length: 307
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 83

Conread position: 1-299
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-314
Cow position:
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 2-260
Cow position:
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 251

Conread position: 2-263
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 206

Conread position: 2-279
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 72

Conread position: 2-279
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 27

Conread position: 2-284
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 43

Conread position: 3-280
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 207

Conread position: 4-282
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 186

Conread position: 4-284
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 191

Conread position: 6-278
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 7-223
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 7-229
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 125

Conread position: 7-252
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 244

Conread position: 7-252
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 216

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 240

Conread position: 7-284
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 251

Conread position: 7-284
Cow position:
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 28

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 214

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 19, 38

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 74

Conread position: 7-284
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 7-294
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 63

Conread position: 7-294
Cow position:
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-294
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 296

Conread position: 7-295
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 128

Conread position: 9-284
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 9-284
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 60

Conread position: 9-284
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 140

Conread position: 9-295
Cow position:
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 295

Conread position: 10-294
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 240

Conread position: 13-211
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 52

Conread position: 13-265
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 81, 38

Conread position: 13-280
Cow position:
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 13-281
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 13-295
Cow position:
Alignm length: 299
Alignm identity: 205
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 15

Conread position: 19-282
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 191

Conread position: 19-282
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 19-284
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 183

Conread position: 20-281
Cow position:
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 98

Conread position: 22-242
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 0

Conread position: 24-279
Cow position:
Alignm length: 275
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 111

Conread position: 24-285
Cow position:
Alignm length: 273
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 29

Conread position: 25-267
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 5

Conread position: 25-270
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 29

Conread position: 26-276
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 39

Conread position: 28-284
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 230

Conread position: 30-279
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 149

Conread position: 36-286
Cow position:
Alignm length: 269
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 157

Conread position: 46-285
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 66

Conread position: 53-279
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 54-269
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 56-279
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 59-303
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 246

Conread position: 64-285
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 168

Conread position: 86-299
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 93-272
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 135

Conread position: 108-284
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 133-294
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 24, 166

Conread position: 135-323
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 149-284
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 62

Conread position: 156-269
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.