Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-134
Cow position: chr17:29302152-29302009 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-135
Cow position: chr17:13967323-13967178 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-135
Cow position: chr17:20230671-20230528 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 1-148
Cow position: chr17:4346607-4346759 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 1-185
Cow position: chr17:2263535-2263338 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-191
Cow position: chr17:37337-37142 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 163

Conread position: 1-212
Cow position: chr17:1704267-1704037 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 10

Conread position: 1-231
Cow position: chr17:31534249-31534012 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 27

Conread position: 1-235
Cow position: chr17:2555163-2555415 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 191

Conread position: 1-241
Cow position: chr17:1881688-1881441 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 70

Conread position: 1-254
Cow position: chr17:4941330-4941593 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 190

Conread position: 1-270
Cow position: chr17:13674896-13675177 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 166

Conread position: 1-277
Cow position: chr17:18195178-18194903 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 45

Conread position: 1-279
Cow position: chr17:3654893-3655199 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 1-279
Cow position: chr17:11784254-11783948 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position: chr17:13694788-13695050 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 87, 54

Conread position: 1-279
Cow position: chr17:39049611-39049308 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-280
Cow position: chr17:4083415-4083116 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 149

Conread position: 1-280
Cow position: chr17:14039639-14039948 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 133

Conread position: 1-280
Cow position: chr17:21418950-21418666 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 57

Conread position: 1-283
Cow position: chr17:1786568-1786864 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 73

Conread position: 1-284
Cow position: chr17:54076-54355 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 19

Conread position: 1-284
Cow position: chr17:2077598-2077907 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 1-284
Cow position: chr17:2581018-2580714 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr17:6069939-6069640 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 1-284
Cow position: chr17:8203331-8203044 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 28

Conread position: 1-284
Cow position: chr17:14215630-14215938 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 1-284
Cow position: chr17:15437180-15436871 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr17:20403816-20403519 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 165

Conread position: 1-284
Cow position: chr17:24783558-24783251 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 191

Conread position: 1-284
Cow position: chr17:33284457-33284744 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 1-284
Cow position: chr17:43989898-43989591 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-295
Cow position: chr17:20099080-20099387 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 1-299
Cow position: chr17:15141959-15142281 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 131

Conread position: 1-303
Cow position: chr17:182969-182648 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 55

Conread position: 1-303
Cow position: chr17:9080024-9080349 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 307

Conread position: 1-303
Cow position: chr17:27793387-27793706 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 301

Conread position: 1-303
Cow position: chr17:34157518-34157192 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 305

Conread position: 1-305
Cow position: chr17:251532-251216 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 1-312
Cow position: chr17:23323052-23323389 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 307

Conread position: 2-281
Cow position: chr17:21769611-21769915 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 2-302
Cow position: chr17:2246691-2247015 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 50

Conread position: 2-310
Cow position: chr17:14936576-14936908 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 311

Conread position: 4-282
Cow position: chr17:20086380-20086675 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 4-285
Cow position: chr17:5228016-5227713 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 6-220
Cow position: chr17:239694-239472 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 17

Conread position: 6-279
Cow position: chr17:2175184-2174897 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 5

Conread position: 6-282
Cow position: chr17:23038954-23038671 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 6-284
Cow position: chr17:15372603-15372310 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 86, 41

Conread position: 6-289
Cow position: chr17:20080490-20080787 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 196

Conread position: 7-241
Cow position: chr17:28027114-28027364 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 7-252
Cow position: chr17:3640515-3640775 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 214

Conread position: 7-282
Cow position: chr17:4061494-4061189 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position: chr17:6121101-6120805 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 215

Conread position: 7-284
Cow position: chr17:11086337-11086637 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position: chr17:14240895-14240589 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 197

Conread position: 7-284
Cow position: chr17:15852083-15851778 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position: chr17:19267444-19267737 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 50

Conread position: 7-284
Cow position: chr17:40806197-40805897 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 7-294
Cow position: chr17:24028614-24028921 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 13-279
Cow position: chr17:6000109-6000384 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 165

Conread position: 13-279
Cow position: chr17:17067607-17067340 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 29, 46

Conread position: 13-285
Cow position: chr17:16121199-16121465 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 143

Conread position: 19-202
Cow position: chr17:732967-733165 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 68

Conread position: 19-284
Cow position: chr17:6261236-6260950 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 25-240
Cow position: chr17:38875852-38875630 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 33

Conread position: 25-278
Cow position: chr17:14295905-14296174 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 21

Conread position: 25-284
Cow position: chr17:22559334-22559059 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 177

Conread position: 26-275
Cow position: chr17:13706151-13705888 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 126

Conread position: 28-202
Cow position: chr17:10842121-10841943 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 119

Conread position: 35-278
Cow position: chr17:20389726-20389991 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 52-284
Cow position: chr17:150551-150795 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 91

Conread position: 59-202
Cow position: chr17:22133581-22133428 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 63

Conread position: 65-284
Cow position: chr17:2149754-2149532 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 62

Conread position: 81-284
Cow position: chr17:42266712-42266506 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 55

Conread position: 95-274
Cow position: chr17:31766744-31766931 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 163

Conread position: 108-278
Cow position: chr17:6611208-6611392 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 147-284
Cow position: chr17:16856283-16856429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.