Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-134
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-135
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-135
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 1-148
Cow position:
Alignm length: 153
Alignm identity: 127
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 1-185
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-191
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 163

Conread position: 1-212
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 10

Conread position: 1-231
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 27

Conread position: 1-235
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 191

Conread position: 1-241
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 70

Conread position: 1-254
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 190

Conread position: 1-270
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 166

Conread position: 1-277
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 45

Conread position: 1-279
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 1-279
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 87, 54

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-280
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 149

Conread position: 1-280
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 133

Conread position: 1-280
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 57

Conread position: 1-283
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 73

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 19

Conread position: 1-284
Cow position:
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 28

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 165

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 191

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 1-284
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-295
Cow position:
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 1-299
Cow position:
Alignm length: 324
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 131

Conread position: 1-303
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 55

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 307

Conread position: 1-303
Cow position:
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 301

Conread position: 1-303
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 305

Conread position: 1-305
Cow position:
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 1-312
Cow position:
Alignm length: 340
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 307

Conread position: 2-281
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 2-302
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 50

Conread position: 2-310
Cow position:
Alignm length: 335
Alignm identity: 241
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 311

Conread position: 4-282
Cow position:
Alignm length: 296
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 4-285
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 6-220
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 17

Conread position: 6-279
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 5

Conread position: 6-282
Cow position:
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 6-284
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 86, 41

Conread position: 6-289
Cow position:
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 196

Conread position: 7-241
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 7-252
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 214

Conread position: 7-282
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 215

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 197

Conread position: 7-284
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 50

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 7-294
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 13-279
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 165

Conread position: 13-279
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 29, 46

Conread position: 13-285
Cow position:
Alignm length: 284
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 143

Conread position: 19-202
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 68

Conread position: 19-284
Cow position:
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 25-240
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 33

Conread position: 25-278
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 21

Conread position: 25-284
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 177

Conread position: 26-275
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 126

Conread position: 28-202
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 119

Conread position: 35-278
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 52-284
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 91

Conread position: 59-202
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 63

Conread position: 65-284
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 62

Conread position: 81-284
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 55

Conread position: 95-274
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 163

Conread position: 108-278
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 147-284
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.