Cow genome map
| Conread name: | reye1619b_p3r1.y1 |
| Conread position: | 1-202 |
| Cow position: | chr19:166519-166736 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 1-232 |
| Cow position: | chr19:5249125-5249368 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 205 |
| Conread position: | 1-255 |
| Cow position: | chr19:342846-342562 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 276 |
| Conread position: | 1-279 |
| Cow position: | chr19:39906-39607 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 1-279 |
| Cow position: | chr19:16319020-16319323 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-281 |
| Cow position: | chr19:43145317-43145019 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 1-282 |
| Cow position: | chr19:40886131-40886418 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 1-284 |
| Cow position: | chr19:256873-256566 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-284 |
| Cow position: | chr19:1587628-1587934 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr19:30756824-30756522 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 1-284 |
| Cow position: | chr19:32210466-32210772 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 177 |
| Conread position: | 1-284 |
| Cow position: | chr19:39666937-39667226 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 1-284 |
| Cow position: | chr19:40815902-40816209 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 1-284 |
| Cow position: | chr19:50724157-50723857 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 1-285 |
| Cow position: | chr19:376106-376422 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-303 |
| Cow position: | chr19:774213-773886 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 310 |
| Conread position: | 1-303 |
| Cow position: | chr19:5899900-5900225 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 304 |
| Conread position: | 1-305 |
| Cow position: | chr19:28405110-28405423 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 1-311 |
| Cow position: | chr19:20106335-20106004 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 305 |
| Conread position: | 1-313 |
| Cow position: | chr19:52150073-52150409 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 308 |
| Conread position: | 2-284 |
| Cow position: | chr19:28595137-28594845 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 2-285 |
| Cow position: | chr19:161533-161828 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 2-313 |
| Cow position: | chr19:7343677-7343344 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 305 |
| Conread position: | 4-294 |
| Cow position: | chr19:29141538-29141228 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 6-269 |
| Cow position: | chr19:35384017-35384298 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 7-189 |
| Cow position: | chr19:2272513-2272702 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 7-282 |
| Cow position: | chr19:7489957-7489656 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-282 |
| Cow position: | chr19:12774707-12774417 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 264 |
| Conread position: | 7-284 |
| Cow position: | chr19:437836-438137 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 7-284 |
| Cow position: | chr19:892033-892322 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 209 |
| Conread position: | 7-284 |
| Cow position: | chr19:4387212-4386920 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 197 |
| Conread position: | 7-284 |
| Cow position: | chr19:28580072-28580359 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 7-284 |
| Cow position: | chr19:33875014-33874729 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 7-284 |
| Cow position: | chr19:39392113-39391812 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 7-295 |
| Cow position: | chr19:39183942-39184247 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 250 |
| Conread position: | 7-320 |
| Cow position: | chr19:33943170-33942839 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 297 |
| Conread position: | 9-279 |
| Cow position: | chr19:206108-205812 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 13-254 |
| Cow position: | chr19:1489399-1489663 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 19-266 |
| Cow position: | chr19:5730441-5730185 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 168 |
| Conread position: | 19-284 |
| Cow position: | chr19:173849-173559 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 19-289 |
| Cow position: | chr19:40850872-40851151 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 20-254 |
| Cow position: | chr19:10508905-10509155 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 22-284 |
| Cow position: | chr19:9706591-9706850 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 24-279 |
| Cow position: | chr19:32204853-32204601 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 24-279 |
| Cow position: | chr19:33527697-33527420 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 25-194 |
| Cow position: | chr19:42583089-42583263 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 25-284 |
| Cow position: | chr19:33653156-33653423 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 27-279 |
| Cow position: | chr19:27036047-27036295 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 37-279 |
| Cow position: | chr19:6713172-6713420 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 102-282 |
| Cow position: | chr19:135302-135485 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 28 |
Show alignments to all cow chromosomes.