Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-145
Cow position:
Alignm length: 153
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 145

Conread position: 1-192
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 66

Conread position: 1-202
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 67

Conread position: 1-212
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 103, 19

Conread position: 1-233
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 19

Conread position: 1-243
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 179

Conread position: 1-267
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 93, 62

Conread position: 1-269
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 61

Conread position: 1-269
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 19, 179

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 56

Conread position: 1-275
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 160

Conread position: 1-276
Cow position:
Alignm length: 294
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 44

Conread position: 1-277
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 163

Conread position: 1-277
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 61

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 167

Conread position: 1-279
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 148

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 131

Conread position: 1-281
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-281
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 1-282
Cow position:
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 28

Conread position: 1-282
Cow position:
Alignm length: 302
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 1-282
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 1-282
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 133

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 273

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 19, 190

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 89

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 1-284
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 52, 136

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 29

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 1-285
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-285
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 171

Conread position: 1-285
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 1-285
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 246

Conread position: 1-288
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 196

Conread position: 1-289
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 225

Conread position: 1-290
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 22

Conread position: 1-292
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 123

Conread position: 1-299
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-300
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 36

Conread position: 1-303
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 307

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 304

Conread position: 1-303
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 306

Conread position: 1-311
Cow position:
Alignm length: 332
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 191

Conread position: 2-200
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 2-201
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 2-279
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 251, 63

Conread position: 2-284
Cow position:
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 3-284
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 124

Conread position: 3-323
Cow position:
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 4-254
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 21, 122

Conread position: 6-257
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 124

Conread position: 6-284
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 38

Conread position: 7-146
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 7-189
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 62

Conread position: 7-252
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 7-255
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 266

Conread position: 7-278
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 7-282
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 162

Conread position: 7-282
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 48

Conread position: 7-283
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 131

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 18, 225

Conread position: 7-284
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 182

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 156

Conread position: 7-284
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 124

Conread position: 7-285
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-294
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 121

Conread position: 7-294
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 303

Conread position: 7-295
Cow position:
Alignm length: 321
Alignm identity: 243
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 18, 171

Conread position: 8-290
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 86, 21

Conread position: 9-254
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 85, 37

Conread position: 10-215
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 90

Conread position: 13-284
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 39

Conread position: 19-270
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 48, 31

Conread position: 19-284
Cow position:
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 19-284
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 19-294
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 303

Conread position: 19-295
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 203

Conread position: 19-299
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 22-273
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 27

Conread position: 23-276
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 53

Conread position: 26-284
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 95

Conread position: 30-201
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 37-284
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 21

Conread position: 55-254
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 118

Conread position: 55-285
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 228, 101

Conread position: 60-227
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 76-284
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 93-280
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 98-281
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 18

Conread position: 108-289
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 160

Conread position: 125-282
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 18

Conread position: 132-294
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 65

Conread position: 140-284
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 111

Show alignments to all cow chromosomes.