Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-124
Cow position: chr20:21717996-21717861 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-164
Cow position: chr20:14869014-14869179 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 56

Conread position: 1-202
Cow position: chr20:8972607-8972825 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 1-215
Cow position: chr20:41364077-41364295 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 85

Conread position: 1-254
Cow position: chr20:26054120-26054403 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 276

Conread position: 1-271
Cow position: chr20:13769418-13769139 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 27

Conread position: 1-273
Cow position: chr20:9547217-9546943 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 153

Conread position: 1-275
Cow position: chr20:32120908-32120607 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 197

Conread position: 1-278
Cow position: chr20:10853780-10854069 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 56

Conread position: 1-279
Cow position: chr20:20753234-20753524 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 67

Conread position: 1-279
Cow position: chr20:30429842-30429538 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 1-280
Cow position: chr20:19356328-19356034 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 103, 22

Conread position: 1-284
Cow position: chr20:824337-824034 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position: chr20:27338767-27338462 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 86

Conread position: 1-285
Cow position: chr20:13787608-13787320 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 174

Conread position: 1-285
Cow position: chr20:18313802-18314084 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 52, 22

Conread position: 1-292
Cow position: chr20:15067022-15066723 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 73

Conread position: 1-294
Cow position: chr20:9344521-9344223 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 1-294
Cow position: chr20:16178194-16178512 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 1-295
Cow position: chr20:24615335-24615637 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 70

Conread position: 1-303
Cow position: chr20:19439486-19439161 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 2-284
Cow position: chr20:9520570-9520874 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 2-285
Cow position: chr20:18968058-18967760 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 43

Conread position: 4-279
Cow position: chr20:33182584-33182871 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 96

Conread position: 4-281
Cow position: chr20:19341198-19340905 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 149

Conread position: 7-231
Cow position: chr20:28162389-28162153 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 0

Conread position: 7-279
Cow position: chr20:15096330-15096629 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 7-279
Cow position: chr20:27870772-27870472 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr20:5536508-5536200 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 267

Conread position: 7-284
Cow position: chr20:13764459-13764164 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 123

Conread position: 7-284
Cow position: chr20:15293545-15293253 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 160

Conread position: 7-284
Cow position: chr20:17660181-17660479 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 59

Conread position: 7-284
Cow position: chr20:21395480-21395183 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 41

Conread position: 7-284
Cow position: chr20:21916201-21915894 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position: chr20:23468102-23468399 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position: chr20:25849265-25849558 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 38

Conread position: 7-284
Cow position: chr20:30687140-30686836 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 7-285
Cow position: chr20:23800448-23800146 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 7-295
Cow position: chr20:28564016-28564328 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 215

Conread position: 7-303
Cow position: chr20:29950089-29949764 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 48

Conread position: 9-284
Cow position: chr20:12570065-12569785 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 154

Conread position: 16-291
Cow position: chr20:27896495-27896772 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 126

Conread position: 17-279
Cow position: chr20:5466559-5466304 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 25

Conread position: 19-247
Cow position: chr20:22698531-22698300 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 26

Conread position: 19-286
Cow position: chr20:12436871-12437160 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 24-279
Cow position: chr20:871460-871739 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 25-277
Cow position: chr20:13499650-13499382 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 180

Conread position: 58-292
Cow position: chr20:22210543-22210298 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 209

Conread position: 80-281
Cow position: chr20:8216992-8216779 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 41

Conread position: 86-294
Cow position: chr20:13678569-13678791 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 10, 209

Conread position: 93-285
Cow position: chr20:5791793-5791600 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 65

Show alignments to all cow chromosomes.