Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-164
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 40

Conread position: 1-167
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 1-218
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 8

Conread position: 1-234
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 1-266
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 227

Conread position: 1-270
Cow position:
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-270
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 129

Conread position: 1-271
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 143

Conread position: 1-278
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 191

Conread position: 1-279
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-280
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 49

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 22

Conread position: 1-281
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 127

Conread position: 1-282
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 24, 66

Conread position: 1-284
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 1-285
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 126

Conread position: 1-285
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-294
Cow position:
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 144

Conread position: 1-295
Cow position:
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 1-295
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 25

Conread position: 1-303
Cow position:
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 1-303
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-303
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 250

Conread position: 1-316
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-318
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 36

Conread position: 1-320
Cow position:
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 338

Conread position: 2-237
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 2-284
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-284
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 185

Conread position: 4-193
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 179

Conread position: 4-254
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 52

Conread position: 4-284
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 6-224
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 186

Conread position: 7-205
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 49

Conread position: 7-242
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 7-247
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-282
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 48

Conread position: 7-284
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 7-284
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 265

Conread position: 7-295
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 264

Conread position: 8-284
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 9-284
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 11, 47

Conread position: 9-284
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 142

Conread position: 9-294
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 65

Conread position: 14-276
Cow position:
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 19-216
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 34

Conread position: 19-254
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 108

Conread position: 19-269
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 232

Conread position: 20-262
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 156

Conread position: 20-284
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 251

Conread position: 22-254
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 24-262
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 30-271
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 90

Conread position: 55-270
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 26

Conread position: 78-262
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 95-278
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 100-279
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 102-279
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.