Cow genome map

Conread name: reye1619b_p3r1.y1

Conread position: 1-164
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 1-164
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 39

Conread position: 1-171
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-231
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 155, 19

Conread position: 1-239
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 163

Conread position: 1-252
Cow position:
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 235

Conread position: 1-252
Cow position:
Alignm length: 264
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 235

Conread position: 1-255
Cow position:
Alignm length: 277
Alignm identity: 211
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 15

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 1-276
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 89, 27

Conread position: 1-278
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 143

Conread position: 1-278
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-279
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 161

Conread position: 1-279
Cow position:
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 151

Conread position: 1-279
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 184

Conread position: 1-281
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 1-281
Cow position:
Alignm length: 306
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 46

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 205

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-284
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 53

Conread position: 1-284
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 191

Conread position: 1-285
Cow position:
Alignm length: 312
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 306

Conread position: 1-285
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 1-285
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 1-287
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 1-288
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 15

Conread position: 1-290
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 305

Conread position: 1-291
Cow position:
Alignm length: 315
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 68

Conread position: 1-294
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 259

Conread position: 1-295
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 250

Conread position: 1-303
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 70

Conread position: 1-303
Cow position:
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-303
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-303
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 300

Conread position: 1-311
Cow position:
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-314
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 111

Conread position: 2-202
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 69

Conread position: 3-283
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 4-213
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 53

Conread position: 4-284
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 38

Conread position: 4-299
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 7-247
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 130

Conread position: 7-284
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 7-284
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 47

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 181

Conread position: 7-284
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 62

Conread position: 7-284
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 7-284
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 17, 183

Conread position: 7-284
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 49

Conread position: 7-294
Cow position:
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 259

Conread position: 7-295
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 306

Conread position: 9-311
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 149

Conread position: 13-279
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 38

Conread position: 13-280
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 10

Conread position: 14-263
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 127

Conread position: 14-284
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 265

Conread position: 14-290
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 125, 14

Conread position: 19-275
Cow position:
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 211

Conread position: 19-281
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 65

Conread position: 19-284
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 19-295
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 47

Conread position: 22-270
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 54

Conread position: 28-236
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 189

Conread position: 30-228
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 52

Conread position: 33-284
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 154

Conread position: 37-279
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 46-274
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 215

Conread position: 52-284
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 12

Conread position: 67-271
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 93

Conread position: 95-284
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 6, 33

Conread position: 144-295
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 13

Conread position: 149-284
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 8

Show alignments to all cow chromosomes.